Evidence map›Paper›PMID 39728991›Full record

ArticleVeterinary sciences2024

Integration Analysis of Transcriptome Sequencing and Whole-Genome Resequencing Reveal Wool Quality-Associated Key Genes in Zhexi Angora Rabbits.

Bohao Zhao, Yongqi Yu, Shaoning Sun, Jiawei Cai, Zhiyuan Bao, Yang Chen, Xinsheng Wu

Abstract read
In one paragraph

Article in Veterinary sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bohao ZhaoCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0003-3333-1001
Yongqi YuCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Shaoning SunCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Jiawei CaiCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0003-0199-5225
Zhiyuan BaoCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Yang ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.
Xinsheng WuCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0001-9871-0251

Funding

China Agriculture Research System of MOF and MARA CARS-43-A-1National Natural Science Foundation of China 32072724National Natural Science Foundation of China 32102529
6 · The paper itself

Abstract

Wool quality is a crucial economic trait in Angora rabbits, closely linked to hair follicle (HF) growth and development. Therefore, understanding the molecular mechanisms of key genes regulating HF growth and wool fiber formation is essential. In the study, fine- and coarse-wool groups were identified based on HF morphological characteristics of Zhexi Angora rabbits. According to the results, the diameters of fine and coarse fibers, and the percentage of coarse fibers, were significantly lower in the fine-wool group than in the coarse-wool group. Additionally, the HF density was higher in the fine-wool group than in the coarse-wool group, and the diameters of both primary hair follicles and second hair follicles were finer in this fine-wool group. Moreover, RNA sequencing (RNA-seq) and whole-genome resequencing (WGRS) were performed to identify key candidate genes and potential genetic variations between fine- and coarse-wool groups. RNA-seq analysis revealed 182 differentially expressed genes (DEGs), with 138 upregulated and 44 downregulated genes in the fine-wool group. The WGRS analysis identified numerous genetic variants including 15,705 InDels and 83,055 SNPs between the two groups. Additionally, the joint analysis of RNA-seq and WGRS showed enrichment of the Wnt, JAK-STAT, and TGF-β signaling pathways. The key overlapping candidate genes such as

Indexed as

Angora rabbitRNA sequencingwhole-genome resequencingwool quality

Identifiers

PMID39728991
PMCPMC11680169

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