Evidence map›Paper›PMID 39726198›Full record

ArticleProteins2025

Similar but Distinct-Biochemical Characterization of the  Staphylococcus aureus Serine Hydrolases FphH and FphI.

Matthias Fellner, George Randall, Ianah R C G Bitac, Annmaree K Warrender, Ashish Sethi, Raz Jelinek, Itamar Kass

Abstract read
In one paragraph

Article in Proteins, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Unique structural and ligand-binding properties of theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Unique structural and ligand binding properties of thebioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Matthias FellnerBiochemistry Department, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.ORCID 0000-0003-3192-6984
George RandallBiochemistry Department, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Ianah R C G BitacBiochemistry Department, School of Biomedical Sciences, University of Otago, Dunedin, New Zealand.
Annmaree K WarrenderAustralian Nuclear Science and Technology Organisation (ANSTO), Australian Synchrotron, Clayton, Victoria, Australia.
Ashish SethiAustralian Nuclear Science and Technology Organisation (ANSTO), Australian Synchrotron, Clayton, Victoria, Australia.
Raz JelinekIlse Katz Institute for Nanoscale Science and Technology (IKI), Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Itamar KassIlse Katz Institute for Nanoscale Science and Technology (IKI), Ben-Gurion University of the Negev, Beer-Sheva, Israel.

Funding

A Synchrotron Radiation Structural Biology ResourcesP30GM133894 · NIGMS · STANFORD UNIVERSITY · PI Aina E. Cohen, KEITH O HODGSON · 2020 to 2026
$43.3M
Mike Murphy and Rob Smith Early Career Research Awards in Biochemistry from the University of Otago Biochemistry DepartmentNew Zealand China - Maurice Wilkins Centre Collaborative Research ProgrammeNew Zealand Synchrotron Group LtdNIGMS NIH HHS P30 GM133894Royal Society Te AparangiThe Sir Charles Hercus Health Research Fellowship of the Health Research Council of New Zealand
6 · The paper itself

Abstract

Staphylococcus aureus is a major cause of infections like bacteremia, pneumonia, and endocarditis. These infections are often linked to the ability of S. aureus to form biofilms. Several S. aureus serine hydrolases have previously been identified to be active during biofilm-forming conditions. Here, we present the biochemical characterization of two of these enzymes-fluorophosphonate binding hydrolase H and I (FphH, FphI). Cryogenic and room-temperature X-ray crystallography, enzymatic substrate profiling, small-angle X-ray scattering analysis, and molecular dynamics simulations provide new insights into similarities and differences between these two hydrolase_4 domain family members. We discover that these enzymes share an overall fold, including a flexible lid or cap region above the active site, which can be seen to be mobile in solution. Differences in the active site pocket and lid residues differentiate them and explain speed differences in their carboxyesterase substrate profile toward small unbranched carbon chain ester molecules. The first analysis of FphI is also compared to our previous knowledge of FphH and its association to stress conditions. These results enable the future precise targeting of Fph serine hydrolase family members with a long-term goal to significantly improve the health and wellbeing of individuals and populations worldwide.

Indexed as

Bacterial ProteinsHydrolasesStaphylococcus aureusCatalytic DomainCrystallography, X-RayGene ExpressionMolecular Dynamics SimulationProtein BindingProtein ConformationRecombinant ProteinsScattering, Small AngleSubstrate SpecificityBacterial ProteinsHydrolasesRecombinant Proteinscap regioncarboxyesterasehydrolase_4lidserine hydrolaseStaphylococcus aureus

Identifiers

PMID39726198
PMCPMC11971002

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.