Evidence map›Paper›PMID 39723813›Full record

ArticlePlant biotechnology journal2025

A novel geminivirus-derived 3' flanking sequence of terminator mediates the gene expression enhancement.

Yi Zhang, Yibo Xian, Heng Yang, Xuangang Yang, Tianli Yu, Sai Liu, Minting Liang, Xianzhi Jiang, Shulin Deng

Abstract read
In one paragraph

Article in Plant biotechnology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. A natural allele ofProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yi Zhang *Key Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0003-0739-2185
Yibo Xian *Moon (Guangzhou) Biotech Co., Ltd, Guangzhou, Guangdong, China.ORCID https://orcid.org/0009-0002-3012-3741
Heng YangKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0001-8603-3847
Xuangang YangKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.
Tianli YuKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.
Sai LiuKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0002-7432-824X
Minting LiangKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.
Xianzhi JiangMoon (Guangzhou) Biotech Co., Ltd, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0003-3900-7763
Shulin DengKey Laboratory of National Forestry and Grassland Administration on Plant Conservation and Utilization in Southern China & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.ORCID https://orcid.org/0000-0002-7231-3415

Funding

Beijing Life Science Academy 2024200CD0180National Natural Science Foundation of China 31871285National Natural Science Foundation of China 32170304Natural Science Foundation of Guangdong Province 2022A1515012572Science and Technology Projects in Guangzhou E33309
6 · The paper itself

Abstract

Exploring the new elements to re-design the expression cassette is crucial in synthetic biology. Viruses are one of the most important sources for exploring gene expression elements. In this study, we found that the DNA sequence of the SBG51 deltasatellite from the Sweet potato leaf curl virus (SPLCV) greatly enhanced the gene expression when flanked downstream of the terminator. The SBG51 sequence increased transient GFP gene expression in Nicotiana benthamiana leaves by up to ~6 times and ~10 times compared to the gene expression controlled by the UBQ10 promoter and 35S promoter alone, respectively. The increased GFP gene expression level contributed to the continuous accumulation of GFP protein and GFP fluorescence until 8 days post-inoculation (dpi). The SBG51 sequence also enhanced the gene expression in the transgenic Arabidopsis plants and maintained the spatio-temporal pattern of the FLOWERING LOCUS T (FT) and TOO MANY MOUTHS (TMM) promoters. We identified a 123 bp of AT-rich sequence containing seven "ATAAA" or "TTAAA" elements from the SBG51 DNA, which had the gene expression enhancement effect. Furthermore, the artificial synthetic sequences containing tandem repeated "ATAAA" or "TTAAA" elements were sufficient to increase the gene expression but did not alter the polyadenylation of mRNA, similar to the function of matrix attachment regions (MAR). Additionally, the compact artificial synthetic sequence also had an effect on yeast when the expression cassette was integrated into the genome. We conclude that the geminivirus deltasatellite-derived sequence and the "ATAAA"/"TTAAA" elements are powerful tools for enhancing gene expression.

Indexed as

BegomovirusGeminiviridaeTerminator Regions, GeneticArabidopsisGene Expression Regulation, PlantGreen Fluorescent ProteinsNicotianaPlant LeavesPlants, Genetically ModifiedPromoter Regions, GeneticGreen Fluorescent ProteinsAT‐rich elementgene expressionMARpromoterSBG51 deltasatelliteterminator

Identifiers

PMID39723813
PMCPMC11933866

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.