Evidence map›Paper›PMID 39723662›Full record

ReviewRNA biology2025

tRNA modifications: greasing the wheels of translation and beyond.

Minjie Zhang, Zhipeng Lu

Abstract readReview
In one paragraph

Review in RNA biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Detection and sequencing of ApProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. tRNA mEMBO reports · 2026
    Article
  8. Article
  9. Review
  10. The impact of psuedouridine modification on human tRNA.Biochemical Society transactions · 2026
    Review
  11. RiboScreenBiomedicines · 2026
    Review
  12. Review
  13. Article
  14. Growth ofBiomolecules · 2026
    Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Minjie ZhangKey Laboratory of Breast Cancer Prevention and Therapy, Tianjin Medical University, Tianjin, China.ORCID 0000-0001-8561-0729
Zhipeng LuDepartment of Pharmacology and Pharmaceutical Sciences, University of Southern California, Los Angeles, CA, USA.

Funding

Decoding global RNP topologies in splicing regulationR01HG012928 · NHGRI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Zhipeng Lu · 2023 to 2026
$2.2M
High Throughput Determination of RNA 3D Structures and Dynamics in VivoR35GM143068 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LU, ZHIPENG · 2021 to 2025
$2.1M
Decoding the RNA Structurome: Method Development and Function Analysis.R00HG009662 · NHGRI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LU, ZHIPENG · 2019 to 2021
$821k
NHGRI NIH HHS R00 HG009662NHGRI NIH HHS R01 HG012928NIGMS NIH HHS R35 GM143068
6 · The paper itself

Abstract

Transfer RNA (tRNA) is one of the most abundant RNA types in cells, acting as an adaptor to bridge the genetic information in mRNAs with the amino acid sequence in proteins. Both tRNAs and small fragments processed from them play many nonconventional roles in addition to translation. tRNA molecules undergo various types of chemical modifications to ensure the accuracy and efficiency of translation and regulate their diverse functions beyond translation. In this review, we discuss the biogenesis and molecular mechanisms of tRNA modifications, including major tRNA modifications, writer enzymes, and their dynamic regulation. We also summarize the state-of-the-art technologies for measuring tRNA modification, with a particular focus on 2'-O-methylation (Nm), and discuss their limitations and remaining challenges. Finally, we highlight recent discoveries linking dysregulation of tRNA modifications with genetic diseases.

Indexed as

Protein BiosynthesisRNA Processing, Post-TranscriptionalRNA, TransferAnimalsHumansMethylationRNA, Transferdetection technologiesRNA modopathiestRNA modification functionstRNA modificationstRNA-modifying enzyme

Identifiers

PMID39723662
PMCPMC12710937

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.