Evidence map›Paper›PMID 39721046›Full record

ArticleDatabase : the journal of biological databases and curation2024

AneRBC dataset: a benchmark dataset for computer-aided anemia diagnosis using RBC images.

Muhammad Shahzad, Syed Hamad Shirazi, Muhammad Yaqoob, Zakir Khan, Assad Rasheed, Israr Ahmed Sheikh, Asad Hayat, Huiyu Zhou

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Article in Database : the journal of biological databases and curation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

8 authors.

Muhammad ShahzadDepartment of Information Technology, Hazara University Mansehra, Dhodial, Mansehra, Khyber Pakhtunkhwa 21120, Pakistan.ORCID 0000-0003-4971-4875
Syed Hamad ShiraziDepartment of Information Technology, Hazara University Mansehra, Dhodial, Mansehra, Khyber Pakhtunkhwa 21120, Pakistan.
Muhammad YaqoobSchool of Physics, Engineering & Computer Science, University of Hertfordshire, College Lane Campus, Hatfield, Hertfordshire AL10 9AB, UK.ORCID 0000-0001-9328-2593
Zakir KhanDepartment of Information Technology, Hazara University Mansehra, Dhodial, Mansehra, Khyber Pakhtunkhwa 21120, Pakistan.
Assad RasheedDepartment of Information Technology, Hazara University Mansehra, Dhodial, Mansehra, Khyber Pakhtunkhwa 21120, Pakistan.
Israr Ahmed SheikhDepartment of Pathology, Shaukat Khanum Memorial Cancer Hospital and Research Centre (SKMCH&RC), 7 A Khayaban-e-Firdousi, Block R3 Block R 3 M.A Johar Town, Lahore, Punjab 5400, Pakistan.
Asad HayatDepartment of Pathology, Shaukat Khanum Memorial Cancer Hospital and Research Centre (SKMCH&RC), 7 A Khayaban-e-Firdousi, Block R3 Block R 3 M.A Johar Town, Lahore, Punjab 5400, Pakistan.
Huiyu ZhouSchool of Computing and Mathematical Sciences, University of Leicester, University Road, Leicester LE1 7RH, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Visual analysis of peripheral blood smear slides using medical image analysis is required to diagnose red blood cell (RBC) morphological deformities caused by anemia. The absence of a complete anaemic RBC dataset has hindered the training and testing of deep convolutional neural networks (CNNs) for computer-aided analysis of RBC morphology. We introduce a benchmark RBC image dataset named Anemic RBC (AneRBC) to overcome this problem. This dataset is divided into two versions: AneRBC-I and AneRBC-II. AneRBC-I contains 1000 microscopic images, including 500 healthy and 500 anaemic images with 1224 × 960 pixel resolution, along with manually generated ground truth of each image. Each image contains approximately 1550 RBC elements, including normocytes, microcytes, macrocytes, elliptocytes, and target cells, resulting in a total of approximately 1 550 000 RBC elements. The dataset also includes each image's complete blood count and morphology reports to validate the CNN model results with clinical data. Under the supervision of a team of expert pathologists, the annotation, labeling, and ground truth for each image were generated. Due to the high resolution, each image was divided into 12 subimages with ground truth and incorporated into AneRBC-II. AneRBC-II comprises a total of 12 000 images, comprising 6000 original and 6000 anaemic RBC images. Four state-of-the-art CNN models were applied for segmentation and classification to validate the proposed dataset. Database URL: https://data.mendeley.com/preview/hms3sjzt7f?a=4d0ba42a-cc6f-4777-adc4-2552e80db22b.

Indexed as

AnemiaErythrocytesDiagnosis, Computer-AssistedHumansImage Processing, Computer-AssistedNeural Networks, Computer

Identifiers

PMID39721046
PMCPMC11918253

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.