Evidence map›Paper›PMID 39718247›Full record

ArticleG3 (Bethesda, Md.)2025

The genome of the solitary bee Tetrapedia diversipes (Hymenoptera, Apidae).

Priscila K F Santos, Natalia de Souza Araujo, Elaine Françoso, John H Werren, Karen M Kapheim, Maria Cristina Arias

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Priscila K F SantosDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, CEP 05508-090, São Paulo, SP, Brazil.ORCID 0000-0002-7118-9010
Natalia de Souza AraujoDepartment of Evolutionary Biology and Ecology, Université Libre de Bruxelles, Av. Franklin Roosevelt 50, 1050 Bruxelles, Belgium.
Elaine FrançosoDepartment of Biological Sciences, School of Life Sciences and the Environment, Royal Holloway University of London, Egham Hill, Egham TW20 0EX, UK.
John H WerrenDepartment of Biology, University of Rochester, 210 Hutchison Rd, Rochester, NY 14620, USA.
Karen M KapheimDepartment of Biology, Utah State University, 5305 Old Main Hill, Logan, UT 84322, USA.ORCID 0000-0002-8140-7712
Maria Cristina AriasDepartamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 277, CEP 05508-090, São Paulo, SP, Brazil.

Funding

CNPq - Conselho Nacional de Desenvolvimento Científico e Tecnológico 306932/2016-4Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) 2013/12530-4USNSF DEB1257053
6 · The paper itself

Abstract

Tetrapedia diversipes is a Neotropical solitary bee commonly found in trap-nests, known for its morphological adaptations for floral oil collection and prepupal diapause during the cold and dry season. Here, we present the genome assembly of T. diversipes (332 Mbp), comprising 2,575 scaffolds, with 15,028 predicted protein-coding genes. Repetitive elements constitute 38.68% of the genome, notably Class II transposable elements. An investigation into lateral gene transfers identified a low frequency (0.037%) of nuclear copies of mitochondrial DNA and 18 candidate regions from bacterial origins. Furthermore, the annotation of 3 scaffolds reveals the presence of the Wolbachia endosymbiont genome, confirming the infection by 2 strains in T. diversipes populations. This genome contributes valuable insights into Neotropical bee genomics, offering a resource for comparative studies and enhancing our understanding of the molecular basis of solitary bee adaptations and interactions.

Indexed as

Genome, InsectAnimalsBeesDNA Transposable ElementsGene Transfer, HorizontalGenomicsMolecular Sequence AnnotationPhylogenyWolbachiaDNA Transposable Elementsde novo assemblygenome sequencingNeotropicaloil-collecting beeTetrapedia diversipes

Identifiers

PMID39718247
PMCPMC11797046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.