Evidence map›Paper›PMID 39717792›Full record

ArticleFrontiers in veterinary science2024

Validation of an infectious bronchitis virus GVIII-specific RT-PCR assay and first detection of IB80-like strains (lineage GVIII-2) in Italy.

Matteo Legnardi, Francesca Poletto, Giovanni Franzo, Valeria Harper, Luca Bianco, Cristina Andolfatto, Angela Blanco, Mar Biarnés, Laura Ramon, Mattia Cecchinato and 1 more

Abstract read
In one paragraph

Article in Frontiers in veterinary science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Matteo LegnardiDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.
Francesca PolettoDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.
Giovanni FranzoDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.
Valeria HarperPrivate Practitioner, Imola, Italy.
Luca BiancoPrivate Practitioner, Imola, Italy.
Cristina AndolfattoDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.
Angela BlancoCESAC-Centre de Sanitat Avícola de Catalunya i Aragó, Reus, Spain.
Mar BiarnésCESAC-Centre de Sanitat Avícola de Catalunya i Aragó, Reus, Spain.
Laura RamonCESAC-Centre de Sanitat Avícola de Catalunya i Aragó, Reus, Spain.
Mattia CecchinatoDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.
Claudia Maria TucciaroneDepartment of Animal Medicine, Production and Health (MAPS), University of Padua, Padua, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infectious bronchitis virus (IBV) is a pathogen causing respiratory, renal and reproductive clinical forms in chickens of all ages and productive categories. Its proneness to mutation and recombination gave rise to a plethora of variants differing in terms of pathogenicity, antigenicity, and distribution, with relevant implications for disease control, mainly pursued by routine vaccination, and diagnosis, requiring a steady update of molecular and serological methods. Among the most recent additions to the current phylogenetic classification, based on S1 gene sequencing, is the discovery of an eighth genotype (GVIII), further divided into lineages GVIII-1 and GVIII-2. GVIII-2, whose best-known representative is IB80, has been reported since 2015 in Europe, the Middle East and Asia. Most detections occurred in layers and breeders and were possibly associated to egg production drops. However, experimental reproduction of its pathogenicity could not be achieved. The significant genetic divergence of GVIII from other genogroups prevents its detection by many of the commonly applied biomolecular tests, hampering the understanding of its spread and impact. This study describes the validation of a GVIII-specific RT-PCR assay and its application to analyze samples collected from layer farms in Italy, where the presence of this genotype has never been investigated. The in-house assay proved highly reliable and allowed to establish the circulation of GVIII-2 in the country: between April and June 2024, 11 out of 84 flocks (13.1%) in 5 out of 24 farms (20.8%) tested positive. Phylogenetically, all Italian strains clustered together, whereas their identity with IB80 was 96.8-97.7%. Reproductive signs were reported in one farm and respiratory signs in another, whereas no clinical findings were recorded in the remaining positive cases. Although no definitive conclusions are possible on their prevalence and clinical relevance, the obtained results suggest that the presence of GVIII-2 strains in Italy is neither novel nor sporadic, highlighting the need to revise diagnostic approaches and shed light on the epidemiology of this novel lineage.

Indexed as

IB80infectious bronchitis virusItalylayermolecular epidemiology

Identifiers

PMID39717792
PMCPMC11665066

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.