Evidence map›Paper›PMID 39716178›Full record

ArticleBiomedical engineering online2024

Multi-branch CNNFormer: a novel framework for predicting prostate cancer response to hormonal therapy.

Ibrahim Abdelhalim, Mohamed Ali Badawy, Mohamed Abou El-Ghar, Mohammed Ghazal, Sohail Contractor, Eric van Bogaert, Dibson Gondim, Scott Silva, Fahmi Khalifa, Ayman El-Baz

Abstract read
In one paragraph

Article in Biomedical engineering online, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ibrahim AbdelhalimDepartment of Bioengineering, University of Louisville, Louisville, KY, USA.
Mohamed Ali BadawyRadiology Department, Urology and Nephrology Center, Mansoura, Egypt.
Mohamed Abou El-GharRadiology Department, Urology and Nephrology Center, Mansoura, Egypt.
Mohammed GhazalElectrical, Computer, and Biomedical Engineering Department, Abu Dhabi University, Abu Dhabi, UAE.
Sohail ContractorDepartment of Radiology, University of Louisville, Louisville, KY, USA.
Eric van BogaertDepartment of Radiology, University of Louisville, Louisville, KY, USA.
Dibson GondimDepartment of Pathology and Laboratory Medicine, University of Louisville, Louisville, KY, USA.
Scott SilvaDepartment of Radiation Oncology, University of Louisville, Louisville, KY, USA.
Fahmi KhalifaElectrical and Computer Engineering Department, Morgan State University, Baltimore, MD, USA.
Ayman El-BazDepartment of Bioengineering, University of Louisville, Louisville, KY, USA. aselba01@louisville.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThis study aims to accurately predict the effects of hormonal therapy on prostate cancer (PC) lesions by integrating multi-modality magnetic resonance imaging (MRI) and the clinical marker prostate-specific antigen (PSA). It addresses the limitations of Convolutional Neural Networks (CNNs) in capturing long-range spatial relations and the Vision Transformer (ViT)'s deficiency in localization information due to consecutive downsampling. The research question focuses on improving PC response prediction accuracy by combining both approaches.

methodsWe propose a 3D multi-branch CNN Transformer (CNNFormer) model, integrating 3D CNN and 3D ViT. Each branch of the model utilizes a 3D CNN to encode volumetric images into high-level feature representations, preserving detailed localization, while the 3D ViT extracts global salient features. The framework was evaluated on a 39-individual patient cohort, stratified by PSA biomarker status.

resultsOur framework achieved remarkable performance in differentiating responders and non-responders to hormonal therapy, with an accuracy of 97.50%, sensitivity of 100%, and specificity of 95.83%. These results demonstrate the effectiveness of the CNNFormer model, despite the cohort's small size.

conclusionThe findings emphasize the framework's potential in enhancing personalized PC treatment planning and monitoring. By combining the strengths of CNN and ViT, the proposed approach offers robust, accurate prediction of PC response to hormonal therapy, with implications for improving clinical decision-making.

Indexed as

Magnetic Resonance ImagingNeural Networks, ComputerProstatic NeoplasmsAgedHormonesHumansImage Processing, Computer-AssistedMaleMiddle AgedProstate-Specific AntigenTreatment OutcomeHormonesProstate-Specific AntigenDeep learningHormonal therapyProstate cancerVision transformer

Identifiers

PMID39716178
PMCPMC11668032

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.