Evidence map›Paper›PMID 39715760›Full record

ArticleNature communications2024

Contributing factors to the oxidation-induced mutational landscape in human cells.

Cameron Cordero, Kavi P M Mehta, Tyler M Weaver, Justin A Ling, Bret D Freudenthal, David Cortez, Steven A Roberts

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Molecular basis of nick ligation in the nucleosome by DNA Ligase IIIα.bioRxiv : the preprint server for biology · 2026
    Article
  9. Article
  10. Article
  11. Review
  12. Environmental Health Is Overlooked in Longevity Research.Antioxidants (Basel, Switzerland) · 2025
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Cameron Cordero *Department of Microbiology and Molecular Genetics, University of Vermont, Burlington, VT, 05405, USA.ORCID 0000-0001-8320-0953
Kavi P M Mehta *Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA. kmehta@wisc.edu.ORCID 0000-0002-2582-073X
Tyler M Weaver *Department of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS, 66160, USA.ORCID 0000-0002-5138-7140
Justin A LingDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS, 66160, USA.ORCID 0000-0003-3886-8764
Bret D FreudenthalDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS, 66160, USA. bfreudenthal@kumc.edu.ORCID 0000-0003-1449-4710
David CortezDepartment of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA. david.cortez@vanderbilt.edu.ORCID 0000-0003-0154-140X
Steven A RobertsDepartment of Microbiology and Molecular Genetics, University of Vermont, Burlington, VT, 05405, USA. srober23@med.uvm.edu.ORCID 0000-0002-3628-5808

Funding

Genome-wide analysis of the formation and mutagenesis of atypical UV photoproducts in skin cancerR01ES032814 · NIEHS · WASHINGTON STATE UNIVERSITY · PI STEVEN A ROBERTS, John J Wyrick · 2021 to 2026
$5.8M
Supplement to NIH Award 2 R35GM128562-06R35GM128562 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Bret D Freudenthal · 2018 to 2026
$4.2M
Functions of SRAP domain proteins in DNA metabolismR01ES030575 · NIEHS · VANDERBILT UNIVERSITY · PI David K Cortez · 2019 to 2026
$3.9M
Regulation of APOBEC3 cytidine deaminase-induced mutation during cancerdevelopmentR01CA269784 · NCI · WASHINGTON STATE UNIVERSITY · PI STEVEN A ROBERTS · 2023 to 2026
$2.0M
The mutagenic consequences of replication-coupled DNA repair mechanismsR00ES034058 · NIEHS · UNIVERSITY OF WISCONSIN-MADISON · PI MEHTA, KAVI · 2023 to 2025
$747k
Base Excision Repair: Mechanisms of DNA Damage Access and Repair in ChromatinF32GM140718 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI WEAVER, TYLER MATHEW · 2021 to 2022
$134k
The mutagenic consequences of replication-coupled DNA repair mechanismsK99ES034058 · NIEHS · VANDERBILT UNIVERSITY · PI MEHTA, KAVI · 2022 to 2022
$102k
The Replication Stress Response to Selective Stalling of the Leading and Lagging StrandsF32GM136096 · NIGMS · VANDERBILT UNIVERSITY · PI MEHTA, KAVI · 2020 to 2021
$81k
NCI NIH HHS R01 CA269784NIEHS NIH HHS K99 ES034058NIEHS NIH HHS R00 ES034058NIEHS NIH HHS R01 ES030575NIEHS NIH HHS R01 ES032814NIGMS NIH HHS F32 GM136096NIGMS NIH HHS F32 GM140718NIGMS NIH HHS R35 GM128562U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA269784U.S. Department of Health & Human Services | NIH | National Institute of Environmental Health Sciences (NIEHS) R00ES034058U.S. Department of Health & Human Services | NIH | National Institute of Environmental Health Sciences (NIEHS) R01ES030575U.S. Department of Health & Human Services | NIH | National Institute of Environmental Health Sciences (NIEHS) R01ES032814U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) F32GM136096U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) F32GM140718U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM128562
6 · The paper itself

Abstract

8-oxoguanine (8-oxoG) is a common oxidative DNA lesion that causes G > T substitutions. Determinants of local and regional differences in 8-oxoG-induced mutability across genomes are currently unknown. Here, we show DNA oxidation induces G > T substitutions and insertion/deletion (INDEL) mutations in human cells and cancers. Potassium bromate (KBrO

Indexed as

BromatesDNA GlycosylasesDNA RepairGuanineMutationNucleosomesOxidation-ReductionChromatinCryoelectron MicroscopyDNADNA DamageHumansMutagenesis8-hydroxyguanineBromatesChromatinDNADNA GlycosylasesGuaninemutY adenine glycosylaseNucleosomesoxoguanine glycosylase 1, humanpotassium bromate

Identifiers

PMID39715760
PMCPMC11666792

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.