Evidence map›Paper›PMID 39713960›Full record

ArticleNeuro-oncology2025

VGLL fusions define a new class of intraparenchymal central nervous system schwannoma.

Simone Schmid, Kanish Mirchia, Anna Tietze, Ilon Liu, Christin Siewert, Jakob Nückles, Jens Schittenhelm, Felix Behling, Matija Snuderl, Christian Hartmann and 27 more

Abstract read
In one paragraph

Article in Neuro-oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. FGFR1 fusions in genomically and epigenetically bona fide glioblastoma, IDH-wildtype.Journal of neuropathology and experimental neurology · 2026
    Article
  6. Article
  7. Beyond Hybrid Morphology: A Large Series of Fusion-Driven Benign Peripheral Nerve Sheath Tumors Including 5 Tumors With Novel Fusions.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2025
    Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

37 authors.

Simone SchmidGerman Cancer Consortium (DKTK), Partner Site Berlin, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-5787-7343
Kanish MirchiaDepartment of Pathology, University of California San Francisco, San Francisco, California, USA.ORCID 0000-0002-7371-7059
Anna TietzeCharité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Institut für Neuroradioloie, Berlin, Germany.
Ilon LiuCharité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Institut für Neurology, Berlin, Germany.ORCID 0000-0002-6186-3630
Christin SiewertCharité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Institut für Neuropathologie, Berlin, Germany.
Jakob NücklesCharité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Institut für Neuropathologie, Berlin, Germany.
Jens SchittenhelmDepartment of Neuropathology, Institute of Pathology and Neuropathology, University Hospital of Tuebingen, Eberhard Karls University of Tuebingen, Tübingen, Germany.ORCID 0000-0002-9168-6209
Felix BehlingHertie Institute for Clinical Brain Research, Tübingen, Germany.
Matija SnuderlLaura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, New York, USA.ORCID 0000-0003-0752-0917
Christian HartmannDepartment of Neuropathology, Institute of Pathology, Hannover Medical School, Hannover, Germany.
Sebastian BrandnerDepartment of Neurodegenerative Disease, UCL Queen Square Institute of Neurology and Division of Neuropathology, The National Hospital for Neurology and Neurosurgery, University College London Hospitals NHS Foundation Trust, London, UK.ORCID 0000-0002-9821-0342
Simon M L PaineNottingham University Hospitals NHS Trust, Queen's Medical Centre, Nottingham, UK.ORCID 0000-0002-1434-3931
Andrey KorshunovClinical Cooperation Unit Neuropathology (B300), German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK), and National Center for Tumour Diseases (NCT), Heidelberg, Germany.
Martin HasselblattInstitute of Neuropathology, University Hospital Münster, Münster, Germany.ORCID 0000-0003-2707-8484
Roland CorasPartner of the European Reference Network (ERN) EpiCARE, Barcelona, Spain.
Sridhar EpariNeurooncology Disease Management Group, Tata Memorial Centre, Dr Ernest Borges Marg and Homi Bhabha National Institute, Mumbai, India.ORCID 0000-0002-1038-5755
Christine StadelmannInstitute of Neuropathology, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0003-1766-5458
Sabrina ZechelInstitute of Neuropathology, University Medical Center Goettingen, Goettingen, Germany.ORCID 0000-0001-5385-2766
Michèle SimonCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, German HIT-LOGGIC-Registry for pLGG in children and adolescents, Department of Pediatric Oncology and Hematology, Berlin, Germany.
Yelena WilsonDepartment of Pathology, Akron Children's, Ohio, USA.ORCID 0000-0003-1725-0041
Francesca GiannoDepartment of Radiological, Oncological and Anatomic Pathology, Sapienza University, Rome, Italy.ORCID 0000-0002-6223-9952
Calixto-Hope G LucasDepartment of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Viktor ZherebitskiyPathology and Laboratory Medicine, University of Saskatchewan, Saskatoon, Saskatchewan, Canada.
Vassil B KaimaktchievProvidence Hood River Memorial Hospital, Hood River, Oregon, USA.
Lorraina RobinsonDepartment of Pathology, University of Utah, Salt Lake City, Utah, USA.ORCID 0009-0005-1098-4909
Kenneth AldapeLaboratory of Pathology, National Cancer Institute, Centre for Cancer Research, Bethesda, Maryland, USA.ORCID 0000-0001-5119-7550
Eelco W HovingPrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Bastiaan B J TopsPrincess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Ashwyn Augustine PereraDivision of Pediatric Glioma Research, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Pauline GöllerDepartment of Neuropathology, University Hospital Heidelberg, Heidelberg, Germany.ORCID 0009-0007-2909-1611
Pablo Hernáiz DrieverCharité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Department of Pediatric Oncology and Hematology, Berlin, Germany.
Pieter WesselingDepartment of Pathology, Amsterdam University Medical Centers/VUmc, Amsterdam, The Netherlands.
Arend KochCharité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Institut für Neuropathologie, Berlin, Germany.ORCID 0000-0001-8589-4688
Arie PerryDepartment of Pathology, University of California San Francisco, San Francisco, California, USA.ORCID 0000-0002-8300-7261
Felix SahmDepartment of Neuropathology, University Hospital Heidelberg and CCU Neuropathology, German Consortium for Translational Cancer Research, German Cancer Research Center, Heidelberg, Germany.ORCID 0000-0001-5441-1962
David T W JonesGerman Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-2036-5141
David CapperGerman Cancer Consortium (DKTK), Partner Site Berlin, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-1945-497X

Funding

Brain Tumour Charity GN-000707
6 · The paper itself

Abstract

backgroundIntracerebral schwannomas are rare tumors resembling their peripheral nerve sheath counterparts but localized in the central nervous system (CNS). They are not classified as a separate tumor type in the 2021 World Health Organization classification. This study aimed to compile and characterize these rare neoplasms morphologically and molecularly.

methodsWe analyzed 20 tumor samples by histology, RNA next-generation sequencing, DNA-methylation profiling, copy number analyses, and single-nucleus RNA sequencing (snRNA-seq). Clinical data, including age, sex, and disease progression, were collected. Magnetic resonance imaging (MRI) series were included when available.

resultsAll cases with tissue available for histology review (n = 13) were morphologically consistent with intracerebral schwannoma, but differed in their extent of glial fibrillary acidic protein staining. All (n = 20) shared DNA-methylation profiles distinct from other CNS tumors, as well as from Vestigial-like family (VGLL)-altered peripheral nerve sheath tumors. Most cases (n = 14/17) harbored fusions of either Vestigial-like family member 3 (VGLL3) or Vestigial-like Family member 1 (VGLL1) (CHD7::VGLL3 [n = 9/17] and EWSR1::VGLL1 [n = 5/17]). In 2 cases, the presence of a VGLL3 fusion was also confirmed by copy number analyses (n = 2/17). MRI (n = 4) showed well-defined, nodular tumors with strong, homogeneous enhancement and no diffusion restriction. Tumors were located throughout the neuroaxis (supratentorial [n = 15], infratentorial [n = 4], and spinal [n = 1]). snRNA-seq of a VGLL1-fused tumor indicated VGLL1 upregulation in 28.6% of tumor cells (n = 1). During a median follow-up of 1.8 years (range 3 months-9 years), none of the tumors recurred (n = 10).

conclusionsWe identify and define a new benign tumor class, designated VGLL-altered intraparenchymal CNS schwannomas. These tumors feature VGLL alterations and a specific DNA-methylation profile, with schwannoma-like histopathology and CNS localization, akin to previously classified intracerebral schwannomas.

Indexed as

Biomarkers, TumorBrain NeoplasmsNerve Tissue ProteinsNeurilemmomaOncogene Proteins, FusionTranscription FactorsAdultAgedDNA MethylationFemaleFollow-Up StudiesHumansMaleMiddle AgedPrognosisYoung AdultBiomarkers, TumorNerve Tissue ProteinsOncogene Proteins, FusionTranscription FactorsgliofibromagliomaschwannomatumorVGLL

Identifiers

PMID39713960
PMCPMC12083230

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.