Evidence map›Paper›PMID 39708811›Full record

ArticleCell reports. Medicine2025

Single-cell analysis of cerebrospinal fluid reveals common features of neuroinflammation.

Benjamin M Jacobs, Christiane Gasperi, Sudhakar Reddy Kalluri, Raghda Al-Najjar, Mollie O McKeon, Jonathan Else, Albert Pukaj, Friederike Held, Stephen Sawcer, Maria Ban and 1 more

Abstract read
In one paragraph

Article in Cell reports. Medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Benjamin M JacobsDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK; Wolfson Institute of Population Health, Queen Mary University of London, London, UK.
Christiane GasperiDepartment of Neurology, Technical University of Munich, Munich, Germany.
Sudhakar Reddy KalluriDepartment of Neurology, Technical University of Munich, Munich, Germany.
Raghda Al-NajjarDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK.
Mollie O McKeonDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK.
Jonathan ElseDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK.
Albert PukajDepartment of Neurology, Technical University of Munich, Munich, Germany.
Friederike HeldDepartment of Neurology, Technical University of Munich, Munich, Germany.
Stephen SawcerDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK. Electronic address: sjs1016@cam.ac.uk.
Maria BanDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK. Electronic address: mb531@cam.ac.uk.
Bernhard HemmerDepartment of Neurology, Technical University of Munich, Munich, Germany; Munich Cluster for Systems Neurology (SyNergy), Munich, Germany. Electronic address: hemmer@tum.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neuroinflammation is often characterized by immune cell infiltrates in the cerebrospinal fluid (CSF). Here, we apply single-cell RNA sequencing to explore the functional characteristics of these cells in patients with various inflammatory, infectious, and non-inflammatory neurological disorders. We show that CSF is distinct from the peripheral blood in terms of both cellular composition and gene expression. We report that the cellular and transcriptional landscape of CSF is altered in neuroinflammation but is strikingly similar across different neuroinflammatory disorders. We find clonal expansion of CSF lymphocytes in all disorders but most pronounced in inflammatory diseases, and we functionally characterize the transcriptional features of these cells. Finally, we explore the genetic control of gene expression in CSF lymphocytes. Our results highlight the common features of immune cells in the CSF compartment across diverse neurological diseases and may help to identify new targets for drug development or repurposing in multiple sclerosis (MS).

Indexed as

Cerebrospinal FluidInflammationNeuroinflammatory DiseasesSingle-Cell AnalysisAdultFemaleHumansLymphocytesMaleMiddle AgedMultiple Sclerosiscerebrospinal fluidclonal expansionmultiple sclerosisneuroinflammationoligoclonal bandsomicssingle-cell sequencing

Identifiers

PMID39708811
PMCPMC11866449

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.