Evidence map›Paper›PMID 39705314›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Zscan4 mediates ubiquitination and degradation of the corepressor complex to promote chromatin accessibility in 2C-like cells.

Jiao Yang, Jiameng Dan, Nannan Zhao, Linlin Liu, Huasong Wang, Qiangqiang Liu, Lingling Wang, Jie Li, Yiwei Wu, Feilong Chen and 14 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Exit from totipotency in mammals: an epigenetic perspective.Frontiers in cell and developmental biology · 2026
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Jiao Yang *State Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0009-0003-4193-6163
Jiameng Dan *State Key Laboratory of Primate Biomedical Research, Institute of Primate Translational Medicine, Kunming University of Science and Technology, Kunming, Yunnan 650500, China.ORCID 0009-0009-9178-881X
Nannan ZhaoState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Linlin LiuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0009-0002-2688-4492
Huasong WangState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Qiangqiang LiuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Lingling WangState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Jie LiState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Yiwei WuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0009-0001-1246-1192
Feilong ChenState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-6678-4966
Weilun FuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Fei LiuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Meiqi LinState Key Laboratory of Primate Biomedical Research, Institute of Primate Translational Medicine, Kunming University of Science and Technology, Kunming, Yunnan 650500, China.ORCID 0009-0007-5828-9360
Weiyu ZhangState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-9530-8088
Fuquan ChenState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.
Xinqi LiuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-6045-718X
Xinyi LuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-3885-3960
Quan ChenState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0001-7539-8728
Xudong WuDepartment of Cell Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China.ORCID 0000-0001-9594-479X
Yuyu NiuState Key Laboratory of Primate Biomedical Research, Institute of Primate Translational Medicine, Kunming University of Science and Technology, Kunming, Yunnan 650500, China.
Na YangState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-6956-6630
Yushan ZhuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-5648-0416
Jiafu LongState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0002-6625-0147
Lin LiuState Key Laboratory of Medicinal Chemical Biology, Nankai University, Tianjin 300350, China.ORCID 0000-0001-9881-6830

Funding

China National Key R&D Program 2018YFA0107000MOST | National Natural Science Foundation of China (NSFC) 32030033MOST | National Natural Science Foundation of China (NSFC) 32270845Tianjin Science and Technology Plan Key Project 20JCZDJC00550
6 · The paper itself

Abstract

Zygotic genome activation occurs in two-cell (2C) embryos, and a 2C-like state is also activated in sporadic (~1%) naïve embryonic stem cells in mice. Elevated chromatin accessibility is critical for the 2C-like state to occur, yet the underlying molecular mechanisms remain elusive. Zscan4 exhibits burst expression in 2C embryos and 2C-like cells. Here, we show that Zscan4 mediates chromatin remodeling to promote the chromatin accessibility for achieving the 2C-like state. Through coimmunoprecipitation/mass spectrometry, we identified that Zscan4 interacts with the corepressors Kap1/Trim28, Lsd1, and Hdac1, also with H3K9me3 modifiers Suv39h1/2, to transiently form a repressive chromatin complex. Then, Zscan4 mediates the degradation of these chromatin repressors by recruiting Trim25 as an E3 ligase, enabling the ubiquitination of Lsd1, Hdac1, and Suv39h1/2. Degradation of the chromatin repressors promotes the chromatin accessibility for activation of the 2C-like state. These findings reveal the molecular insights into the roles of Zscan4 in promoting full activation of the 2C-like state.

Indexed as

ChromatinRepressor ProteinsTranscription FactorsUbiquitinationAnimalsChromatin Assembly and DisassemblyHistone Deacetylase 1Histone DemethylasesHumansMethyltransferasesMiceProteolysisTripartite Motif-Containing Protein 28ChromatinHistone Deacetylase 1Histone DemethylasesMethyltransferasesRepressor ProteinsTranscription FactorsTripartite Motif-Containing Protein 282C like statechromatin accessibilityubiquitinationZscan4zygotic genome activation

Identifiers

PMID39705314
PMCPMC11670194

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.