Evidence map›Paper›PMID 39702718›Full record

ReviewMethods in molecular biology (Clifton, N.J.)2025

Modeling ncRNA Synergistic Regulation in Cancer.

Junpeng Zhang, Chenchen Xiong, Xuemei Wei, Haolin Yang, Chunwen Zhao

Abstract readReview
PubMed Publisher
In one paragraph

Review in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. NScientific reports · 2025
    Article
  3. LncRNA TYMSOS stimulates immune escape and the advancement of cervical squamous cell carcinoma by regulating miR-134-5p/KRAS expression.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Junpeng ZhangSchool of Engineering, Dali University, Dali, Yunnan, China.
Chenchen XiongSchool of Engineering, Dali University, Dali, Yunnan, China.
Xuemei WeiSchool of Engineering, Dali University, Dali, Yunnan, China.
Haolin YangSchool of Engineering, Dali University, Dali, Yunnan, China.
Chunwen ZhaoSchool of Engineering, Dali University, Dali, Yunnan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancer seriously threatens human life and health, and the structure and function of genes within cancer cells have changed relative to normal cells. Essentially, cancer is a polygenic disorder, and the core of its occurrence and development is caused by polygenic synergy. Non-coding RNAs (ncRNAs) act as regulators to modulate gene expression levels, and they provide theoretical basis and new technology for the diagnosis and preventive treatment of cancer. However, the study of ncRNA regulation and its role as biomarkers in cancer remain largely unearthed. Driven by multi-omics data, an abundance of computational methods, tools, and databases have been developed for predicting ncRNA-cancer association/causality, inferring ncRNA regulation, and modeling ncRNA synergistic regulation. This chapter aims to provide a comprehensive perspective of modeling ncRNA synergistic regulation. Since the ncRNAs involved in cancer contribute to modeling cancer-associated ncRNA synergistic regulation, we first review the databases and tools of cancer-related ncRNAs. Then we investigate the existing tools or methods for modeling ncRNA-directed and ncRNA-mediated regulation. In addition, we survey the available computational tools or methods for modeling ncRNA synergistic regulation, including synergistic interaction and synergistic competition. Finally, we discuss the future directions and challenges in modeling ncRNA synergistic regulation.

Indexed as

Computational BiologyGene Expression Regulation, NeoplasticNeoplasmsRNA, UntranslatedBiomarkers, TumorDatabases, GeneticHumansBiomarkers, TumorRNA, UntranslatedCancerceRNAmiRNAmRNAncRNAncRNA regulationncRNA synergistic regulation

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.