Evidence map›Paper›PMID 39702467›Full record

ArticleScientific data2024

IPD-Brain: An Indian histopathology dataset for glioma subtype classification.

Ekansh Chauhan, Amit Sharma, Megha S Uppin, Manasa Kondamadugu, C V Jawahar, P K Vinod

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Multi-Omics Integration for Advancing Glioma Precision Medicine.Annals of clinical and translational neurology · 2026
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ekansh ChauhanCentre for Visual Information Technology, International Institute of Information Technology, Hyderabad, 500032, India. ekansh.chauhan@research.iiit.ac.in.
Amit SharmaCentre for Visual Information Technology, International Institute of Information Technology, Hyderabad, 500032, India.
Megha S UppinDepartment of Pathology, Nizam's Institute Of Medical Sciences, Hyderabad, 500082, India.
Manasa KondamaduguIHub-Data, International Institute of Information Technology, Hyderabad, 500032, India.
C V JawaharCentre for Visual Information Technology, International Institute of Information Technology, Hyderabad, 500032, India.
P K VinodCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, 500032, India. vinod.pk@iiit.ac.in.ORCID 0000-0003-2968-498X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effective management of brain tumors relies on precise typing, subtyping, and grading. We present the IPD-Brain Dataset, a crucial resource for the neuropathological community, comprising 547 high-resolution H&E stained slides from 367 patients for the study of glioma subtypes and immunohistochemical biomarkers. Scanned at 40x magnification, this dataset is one of the largest in Asia, specifically focusing on the Indian demographics. It encompasses detailed clinical annotations, including patient age, sex, radiological findings, diagnosis, CNS WHO grade, and IHC biomarker status (IDH1R132H, ATRX and TP53 along with proliferation index, Ki67), providing a rich foundation for research. The dataset is open for public access and is designed for various applications, from machine learning model training to the exploration of regional and ethnic disease variations. Preliminary validations utilizing Multiple Instance Learning for tasks such as glioma subtype classification and IHC biomarker identification underscore its potential to significantly contribute to global collaboration in brain tumor research, enhancing diagnostic precision and understanding of glioma variability across different populations.

Indexed as

Brain NeoplasmsGliomaBiomarkers, TumorFemaleHumansIndiaMachine LearningMaleBiomarkers, Tumor

Identifiers

PMID39702467
PMCPMC11659595

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.