Evidence map›Paper›PMID 39700310›Full record

ArticlePLoS neglected tropical diseases2024

Melioidosis in goats at a single Australian farm was caused by multiple diverse lineages of Burkholderia pseudomallei present in soil.

Joseph D Busch, Mirjam Kaestli, Mark Mayo, Chandler C Roe, Adam J Vazquez, Jodie Low Choy, Glenda Harrington, Suresh Benedict, Nathan E Stone, Christopher J Allender and 6 more

Abstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Joseph D BuschPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Mirjam KaestliMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.
Mark MayoMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.
Chandler C RoePathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Adam J VazquezPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Jodie Low ChoyMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.
Glenda HarringtonMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.
Suresh BenedictDepartment of Industry, Tourism and Trade, Berrimah Veterinary Laboratory, Berrimah, Northern Territory, Australia.
Nathan E StonePathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Christopher J AllenderPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Richard A BowenDepartment of Biological Sciences, Colorado State University, Ft. Collins, Colorado, United States of America.
Paul KeimPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Bart J CurrieMenzies School of Health Research, Charles Darwin University, Casuarina, Northern Territory, Australia.
Jason W SahlPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.
Apichai TuanyokDepartment of Infectious Diseases and Immunology, College of Veterinary Medicine, and Emerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
David M WagnerPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, United States of America.ORCID 0000-0003-2684-6007

Funding

Vaccines and Diagnostics TrialsU54AI065359 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI BARBOUR, ALAN G. · 2005 to 2013
$88.8M
Burkholderia: International Collaborative Development of Novel DiagnosticsU01AI075568 · NIAID · TRANSLATIONAL GENOMICS RESEARCH INST · PI KEIM, PAUL STEPHEN · 2007 to 2011
$4.5M
NIAID NIH HHS U01 AI075568NIAID NIH HHS U54 AI065359
6 · The paper itself

Abstract

backgroundBurkholderia pseudomallei, causative agent of melioidosis, is a One Health concern as it is acquired directly from soil and water and causes disease in humans and agricultural and wild animals. We examined B. pseudomallei in soil and goats at a single farm in the Northern Territory of Australia where >30 goats acquired melioidosis over nine years. METHODOLOGY/PRINCIPAL

findingsWe cultured 45 B. pseudomallei isolates from 35 goats and sampled soil in and around goat enclosures to isolate and detect B. pseudomallei and evaluate characteristics associated with its occurrence; 33 soil isolates were obtained from 1993-1994 and 116 in 2006. Ninety-two goat and soil isolates were sequenced; mice were challenged with six soil isolates to evaluate virulence. Sampling depth and total N/organic C correlated with B. pseudomallei presence. Twelve sequence types (STs) were identified. Most goat infections (74%) were ST617, some with high similarity to 2006 soil isolates, suggesting ST617 was successful at persisting in soil and infecting goats. ST260 and ST266 isolates were highly virulent in mice but other isolates produced low/intermediate virulence; three of these were ST326 isolates, the most common soil ST in 2006. Thus, virulent and non-virulent lineages can co-occur locally. Three genes associated with virulence were present in ST260 and ST266, absent in most ST326 isolates, and present or variably present in ST617. CONCLUSIONS/SIGNIFICANCE: Agricultural animals can influence B. pseudomallei abundance and diversity in local environments. This effect may persist, as B. pseudomallei was detected more often from soil collected inside and adjacent to goat enclosures years after most goats were removed. Following goat removal, the low virulence ST326, which was not isolated from soil when goats were present, became the predominant ST in soil by 2006. Although multiple diverse lineages of B. pseudomallei may exist in a given location, some may infect mammals more efficiently than others.

Indexed as

Burkholderia pseudomalleiFarmsGoat DiseasesGoatsMelioidosisSoil MicrobiologyAnimalsMiceNorthern TerritorySequence Analysis, DNAVirulence

Identifiers

PMID39700310
PMCPMC11698569

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.