Evidence map›Paper›PMID 39700072›Full record

ArticlePloS one2024

Species diversity in the new lamprey genus Occidentis, formerly classified as western North American 'Lampetra'.

Kellie J Carim, Grace Auringer, Margaret F Docker, Claude B Renaud, Benjamin J Clemens, Monica R Blanchard, Christina Parker, Michael K Young

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kellie J CarimAldo Leopold Wilderness Research Institute, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America.ORCID 0000-0002-9622-9146
Grace AuringerDepartment of Animal Science, University of California, Davis, California, United States of America.
Margaret F DockerDepartment of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, Canada.
Claude B RenaudResearch and Collections, Canadian Museum of Nature, Ottawa, Ontario, Canada.
Benjamin J ClemensCorvallis Research Lab, Oregon Department of Fish and Wildlife, Corvallis, Oregon, United States of America.
Monica R BlanchardWashington Department of Fish and Wildlife, Ridgefield, Washington, United States of America.ORCID 0009-0009-5112-5288
Christina ParkerCalifornia Department of Fish and Wildlife, Sacramento, California, United States of America.ORCID 0000-0003-0214-1301
Michael K YoungNational Genomics Center for Wildlife and Fish Conservation, Rocky Mountain Research Station, U.S. Forest Service, Missoula, Montana, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate taxonomy is fundamental to the study and conservation of biodiversity. Because of their morphological similarities, most brook and river lampreys in western North America have been placed in the genus Lampetra along with lampreys from Eurasia and eastern North America. However, molecular-based phylogenetic studies dating back several decades indicate that lampreys from Pacific drainages are genetically distinct from Atlantic Lampetra. Reviewing previous phylogenetic analysis of two mitochondrial and two nuclear genes for Northern Hemisphere lampreys, we assign these western North American brook and river lampreys to a new genus, Occidentis. To assess species diversity within Occidentis, we performed a species delimitation analysis using all publicly available cytochrome b sequences of the genus. Similar to previous studies, O. ayresii and O. richardsoni were not reciprocally monophyletic and are best categorized as life history variants of a single species. In addition to O. pacifica, O. hubbsi, and the diverse O. ayresii species complex, as many as seven undescribed candidate species from Oregon and California were identified, supporting results from previous studies with more geographically limited datasets. One specimen from Paynes Creek, California, was identified as a candidate species, although this single individual showed minimal interspecific divergence (1.34%) with O. hubbsi. Further genetic assessment along with information on morphology and phylogeography is needed to determine whether the variation observed between groups of candidate species represents distinct species or divergent lineages within a species complex. Additional sampling will inform whether there are additional species not currently represented in this dataset. Thus, the number of species formally recognized under Occidentis is subject to change with new information. Systematic assessment of the distribution and phylogenetic complexity within Occidentis will enhance our understanding of its evolutionary history and taxonomic diversity, which will guide efforts to conserve the biodiversity of lampreys.

Indexed as

LampreysPhylogenyAnimalsBiodiversityCytochromes bDNA, MitochondrialGenetic VariationNorth AmericaSpecies SpecificityCytochromes bDNA, Mitochondrial

Identifiers

PMID39700072
PMCPMC11658800

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.