Evidence map›Paper›PMID 39699723›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Use of the D4H Probe to Track Sterols in Yeast.

Isabel María Fernández-Golbano, Patricia García, Elena Rebollo, María Isabel Geli, Javier Encinar Del Dedo

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Isabel María Fernández-GolbanoInstitute for Molecular Biology of Barcelona, CSIC, Barcelona, Spain.
Patricia GarcíaInstitute of Functional Biology and Genomics, CSIC, University of Salamanca, Salamanca, Spain.
Elena RebolloInstitute for Molecular Biology of Barcelona, CSIC, Barcelona, Spain.
María Isabel GeliInstitute for Molecular Biology of Barcelona, CSIC, Barcelona, Spain. mgfbmc@ibmb.csic.es.
Javier Encinar Del DedoInstitute of Functional Biology and Genomics, CSIC, University of Salamanca, Salamanca, Spain. jedel_dedo@usal.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cholesterol is a fundamental component of cellular membranes, and its organization, distribution, and recycling are tightly regulated. Cholesterol can form, together with other lipids and proteins, membrane nanodomains, which play important roles in membrane trafficking, the spatiotemporal organization of signal transduction, or the modulation of plasma membrane transporters, among others. Not surprisingly then, the misregulation of cholesterol biosynthetic and transport pathways has been related to numerous diseases, including neurodegenerative and metabolic disorders. Here, we focus on the cholesterol-binding domain 4 (D4) of perfringolysin O (PFO, theta toxin) and its use as a probe to define the dynamics and subcellular localization of yeast sterols using time-lapse live-cell fluorescence microscopy. In combination with drugs that acutely interfere with sterol synthesis, such as terbinafine, the probe can also be used to monitor in real-time the extraction of sterols from specialized endoplasmic reticulum subdomains named ERSES (endoplasmic reticulum sterol exit sites) by the OSBP-related protein Osh2.

Indexed as

Saccharomyces cerevisiaeSterolsBacterial ToxinsCholesterolEndoplasmic ReticulumHemolysin ProteinsMicroscopy, FluorescenceSaccharomyces cerevisiae ProteinsTerbinafineBacterial ToxinsCholesterolClostridium perfringens theta-toxinHemolysin ProteinsSaccharomyces cerevisiae ProteinsSterolsTerbinafineD4HErgosterolMembrane traffickingPerfringolysin OYeast

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.