Evidence map›Paper›PMID 39696868›Full record

ArticleMathematical biosciences and engineering : MBE2024

Identifiability investigation of within-host models of acute virus infection.

Yuganthi R Liyanage, Nora Heitzman-Breen, Necibe Tuncer, Stanca M Ciupe

Abstract read
In one paragraph

Article in Mathematical biosciences and engineering : MBE, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Yuganthi R LiyanageDepartment of Mathematics and Statistics, Florida Atlantic University, Boca Raton, FL, USA.
Nora Heitzman-BreenDepartment of Mathematics, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA.
Necibe TuncerDepartment of Mathematics and Statistics, Florida Atlantic University, Boca Raton, FL, USA.
Stanca M CiupeDepartment of Mathematics, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA.

Funding

Collaborative Research: DMS/NIGMS 1: Identifiability investigation of Multi-scale Models of Infectious DiseasesR01GM152743 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI CIUPE, STANCA M. · 2023 to 2025
$600k
NIGMS NIH HHS R01 GM152743
6 · The paper itself

Abstract

Uncertainty in parameter estimates from fitting within-host models to empirical data limits the model's ability to uncover mechanisms of infection, disease progression, and to guide pharmaceutical interventions. Understanding the effect of model structure and data availability on model predictions is important for informing model development and experimental design. To address sources of uncertainty in parameter estimation, we used four mathematical models of influenza A infection with increased degrees of biological realism. We tested the ability of each model to reveal its parameters in the presence of unlimited data by performing structural identifiability analyses. We then refined the results by predicting practical identifiability of parameters under daily influenza A virus titers alone or together with daily adaptive immune cell data. Using these approaches, we presented insight into the sources of uncertainty in parameter estimation and provided guidelines for the types of model assumptions, optimal experimental design, and biological information needed for improved predictions.

Indexed as

Influenza A virusInfluenza, HumanAcute DiseaseAdaptive ImmunityAlgorithmsAnimalsComputer SimulationHost-Pathogen InteractionsHumansModels, BiologicalModels, ImmunologicalModels, TheoreticalUncertaintyViral LoadVirus Diseasesinfluenza virusmathematical modelingoptimal experimental designprofile likelihoodstructural identifiability

Identifiers

PMID39696868
PMCPMC12182237

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.