Evidence map›Paper›PMID 39695514›Full record

ArticleBMC cancer2024

Proteomic and metabolomic exploration in relapse acute myeloid leukemia bone marrow supernatant combined with genetic characteristics.

Xinyao Ji, Cheng Yang, Changchun Niu

Abstract read
In one paragraph

Article in BMC cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Xinyao JiDepartment of Laboratory Medicine, Chongqing General Hospital, Chongqing University, No.118, Xingguang Avenue, Liangjiang New Area, Chongqing, 401147, China.
Cheng YangMedical Center of Hematology, Xinqiao Hospital, Army Medical University, Chongqing, 400037, China. yangcheng1836@163.com.
Changchun NiuDepartment of Laboratory Medicine, Chongqing General Hospital, Chongqing University, No.118, Xingguang Avenue, Liangjiang New Area, Chongqing, 401147, China. bright_star2000@163.com.ORCID http://orcid.org/0000-0002-8847-7369

Funding

Chongqing Health Commission and Science and Technology Bureau No. 2024MSXM105
6 · The paper itself

Abstract

objectAim to investigate the multi-omic characteristics of the bone marrow supernatant of relapsed acute myeloid leukemia (AML) and search for proteins and metabolites associated with relapse.

methodsA total of 40 bone marrow supernatant from 7 patients with relapsed AML and 33 patients with non-relapsed AML were collected for proteomics and metabonomics analysis. Unsupervised clustering was used to discover the characteristics of proteins and metabolites. The prognostic significances of proteins were assessed concerning the relapse status(including death) and relapse-free survival.

resultTotally 996 proteins and 4,831 metabolites were identified in bone marrow supernatant, and two of 7 clusters were revealed through unsupervised clustering and were associated with ASXL1, TP53, and RUNX1 mutations, which were listed as high-risk factors in the 2022 edition of the WHO classification of tumors of the hematopoietic and lymphoid tissues. Among the identified proteins and metabolites, 57 proteins and 190 metabolites were found to be closely related to relapse.

conclusionThis study has revealed a significant correlation between protein expression in the bone marrow microenvironment of AML and three high-risk mutations: ASXL1, TP53, and RUNX1. Based on this finding, we further identified 227 differential proteins closely associated with these three mutations, as well as 57 proteins directly related to disease recurrence. Additionally, lipid metabolism plays a crucial role in the occurrence and development of AML within its bone marrow microenvironment.

Indexed as

Bone MarrowCore Binding Factor Alpha 2 SubunitLeukemia, Myeloid, AcuteMetabolomicsMutationProteomicsAdultAgedBiomarkers, TumorFemaleHumansMaleMiddle AgedNeoplasm Recurrence, LocalPrognosisRepressor ProteinsASXL1 protein, humanBiomarkers, TumorCore Binding Factor Alpha 2 SubunitRepressor ProteinsRUNX1 protein, humanTP53 protein, humanTumor Suppressor Protein p53Acute myeloid leukemiaBone marrow microenvironmentMetabolomicPrognosisProteomicRelapse

Identifiers

PMID39695514
PMCPMC11657831

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.