Evidence map›Paper›PMID 39695388›Full record

ArticleBMC genomics2024

Genome-wide characterization of Solanum tuberosum UGT gene family and functional analysis of StUGT178 in salt tolerance.

Yu Ma, Jiafeng Song, Suao Sheng, Daijuan Wang, Tongtong Wang, Nan Wang, Airu Chen, Lixia Wang, Yaxuan Peng, Yuhan Ma and 3 more

Abstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  6. Genome-Wide Characterization of the Phosphofructokinase Gene Family inInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yu Ma *School of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Jiafeng Song *School of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Suao ShengSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Daijuan WangSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Tongtong WangSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Nan WangSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Airu ChenSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Lixia WangSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Yaxuan PengSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Yuhan MaSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China.
Zhaoyan LvSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China. lvzhaoyan@126.com.
Xiaobiao ZhuSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China. xiaobiao11302005@163.com.
Hualan HouSchool of Horticulture, Anhui Agricultural University, Hefei, 230036, China. hhl@ahau.edu.cn.

Funding

the Anhui Provincial Natural Science Foundation 2108085QC122the Anhui Provincial Natural Science Foundation 2308085MC85the National Natural Science Foundation of China 32201853the Natural Science Research Projects of Anhui Province University KJ2020A0098the Natural Science Research Projects of Anhui Province University KJ2021ZD0013
6 · The paper itself

Abstract

UDP-glycosyltransferases (UGTs) widely exist in plants and play essential roles in catalyzing the glycosylation reaction associated with metabolic processes. UGT gene family has been identified in many species to date. However, the comprehensive identification and systematic analysis have not been documented yet in the latest potato genome. In this study, a total of 295 UGT members (StUGT) were identified and found to be unevenly distributed on twelve chromosomes of potato. All StUGT genes were classified into 17 groups (A-P, R) and the UGT genes within the same groups have similar structural characterization. Tandem duplication was the major driving force for the StUGT gene expansion. The prediction of cis-acting elements showed that the development process, light, phytohormone, and abiotic stress-responsive elements generally existed in StUGT promoter regions. Analysis of spatial and temporal expression patterns demonstrated that StUGT genes were widely and differentially expressed in various tissues. Additionally, to investigate the salt stress-responsive genes, we analyzed the expression profiles of the StUGT genes under salt treatment. A total of 50 and 20 StUGT genes were continuously up- and down-regulated, respectively, implicating that these genes were involved in the regulation of salt tolerance. Among them, the StUGT178 gene, which was significantly induced by salt stress and contains salt-responsive element, was considered as one of the most relevant candidate genes. Transient transformation of the StUGT178 promoter in tobacco revealed that the transcriptional activation activity of the StUGT178 gene was strengthened under salt treatment. Furthermore, the heterologous expressions of the promoter and coding protein of the StUGT178 gene in Arabidopsis further demonstrated that the StUGT178 gene significantly responds to salt treatment, and enhanced salinity tolerance by regulating antioxidant enzyme activity and H

Indexed as

Gene Expression Regulation, PlantMultigene FamilySalt ToleranceSolanum tuberosumGenome, PlantGlucuronosyltransferasePhylogenyPlant ProteinsPromoter Regions, GeneticStress, PhysiologicalGlucuronosyltransferasePlant ProteinsExpression profilePotatoSalt stressStUGT178UGT gene family

Identifiers

PMID39695388
PMCPMC11657656

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.