Evidence map›Paper›PMID 39695373›Full record

ArticleBMC genomics2024

Genomic analyses revealed low genetic variation in the intron-exon boundary of the doublesex gene within the natural populations of An. gambiae s.l. in Burkina Faso.

Mahamadi Kientega, Ioanna Morianou, Nouhoun Traoré, Nace Kranjc, Honorine Kaboré, Odette N Zongo, Abdoul-Azize Millogo, Patric Stephane Epopa, Franck A Yao, Adrien M G Belem and 2 more

Erratum issuedAbstract read
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Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Mahamadi KientegaInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso. mkient54@gmail.com.
Ioanna MorianouDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Nouhoun TraoréInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Nace KranjcDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Honorine KaboréInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Odette N ZongoInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Abdoul-Azize MillogoInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Patric Stephane EpopaInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Franck A YaoInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso.
Adrien M G BelemUniversité Nazi BONI, Bobo-Dioulasso, 01 BP 1091, Burkina Faso.
Austin BurtDepartment of Life Sciences, Imperial College London, London, SW7 2AZ, UK.
Abdoulaye DiabatéInstitut de Recherche en Sciences de la Santé, Bobo-Dioulasso, 01 BP 545, Burkina Faso. npiediab@gmail.com.

Funding

Bill and Melinda Gates Foundation INV006610Bill and Melinda Gates Foundation INV037164Gates Foundation INV-006610Open Philanthropy Project 2016-161185Wellcome Trust
6 · The paper itself

Abstract

backgroundThe recent success of a population control gene drive targeting the doublesex gene in Anopheles gambiae paved the way for developing self-sustaining and self-limiting genetic control strategies targeting the sex determination pathway to reduce and/or distort the reproductive capacity of insect vectors. However, targeting these genes for genetic control requires a better understanding of their genetic variation in natural populations to ensure effective gene drive spread. Using whole genome sequencing (WGS) data from the Ag1000G project (Ag3.0, 3.4 and 3.8), and Illumina pooled amplicon sequencing, we investigated the genetic polymorphism of the intron-4-exon-5 boundary of the doublesex gene in the natural populations of An. gambiae sensu lato (s.l.).

resultsThe analyses showed a very low variant density at the gRNA target sequence of the Ag(QFS)1 gene drive (previously called dsxF

conclusionThese findings will guide the implementation of doublesex-targeted gene drives to support the current control tools in malaria elimination efforts. Our methods can be applied to efficiently monitor the evolution of any sequence of interest in a natural population via pooled amplicon sequencing, surpassing the need for WGS.

Indexed as

AnophelesExonsIntronsPolymorphism, Single NucleotideAnimalsBurkina FasoGenetic VariationGenomicsWhole Genome SequencingAn. Gambiae s.lDoublesex geneGene driveGenetic polymorphism

Identifiers

PMID39695373
PMCPMC11657786

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.