Evidence map›Paper›PMID 39692580›Full record

ArticleThe Plant cell2024

Species- and organ-specific contribution of peroxisomal cinnamate:CoA ligases to benzoic and salicylic acid biosynthesis.

Yukang Wang, Huiying Miao, Jiehua Qiu, Menghui Liu, Gaochen Jin, Wenxuan Zhang, Shuyan Song, Pengxiang Fan, Xiufang Xin, Jianping Hu and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Towards an integrated molecular understanding of plant hormones.Journal of integrative plant biology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yukang WangState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0003-0737-6986
Huiying MiaoState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0002-6869-3865
Jiehua QiuState Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, Zhejiang 311400, China.ORCID 0000-0002-6990-7247
Menghui LiuNational Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China.ORCID 0009-0003-4143-9001
Gaochen JinState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0009-0008-5992-9881
Wenxuan ZhangState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0009-0001-5626-2427
Shuyan SongState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0003-1326-7436
Pengxiang FanState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0002-4560-3783
Xiufang XinNational Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China.ORCID 0000-0002-4037-3528
Jianping HuMichigan State University-Department of Energy Plant Research Laboratory and Plant Biology Department, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0002-4635-4299
Ran LiState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0002-5037-0582
Ronghui PanState Key Laboratory of Rice Biology and Breeding, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang 310058, China.ORCID 0000-0002-4264-5566

Funding

China National Postdoctoral Program for Innovative Talents BX20230322China Postdoctoral Science Foundation 2023M743091National Key Research and Development Program 2022YFD1401600National Natural Science Foundation of China 32200231Zhejiang Provincial Natural Science Foundation of China LZ23C020002
6 · The paper itself

Abstract

Salicylic acid (SA) is a prominent defense hormone whose basal level, organ-specific accumulation, and physiological role vary widely among plant species. Of the 2 known pathways of plant SA biosynthesis, the phenylalanine ammonia lyase (PAL) pathway is more ancient and universal but its biosynthetic and physiological roles in diverse plant species remain unclear. Studies in which the PAL pathway is specifically or completely inhibited, as well as a direct comparison of diverse species and different organs within the same species, are needed. To this end, we analyzed the PAL pathway in rice (Oryza sativa) and Arabidopsis (Arabidopsis thaliana), 2 distantly related model plants whose basal SA levels and distributions differ tremendously at the organism and tissue levels. Based on our recent identification of the rice peroxisomal cinnamate:CoA ligases (CNLs), we identified 2 peroxisomal CNLs from Arabidopsis and showed CNL as the most functionally specific enzyme among the known enzymes of the PAL pathway. We then revealed the species- and organ-specific contribution of the PAL pathway to benzoic and salicylic acid biosynthesis and clarified its physiological importance in rice and Arabidopsis. Our findings highlight the necessity to consider species and organ types in future SA-related studies and may help to breed new disease-resistant crops.

Indexed as

ArabidopsisBenzoic AcidCoenzyme A LigasesOryzaPeroxisomesSalicylic AcidCinnamatesGene Expression Regulation, PlantOrgan SpecificityPhenylalanine Ammonia-LyasePlant ProteinsSpecies SpecificityBenzoic AcidCinnamatesCoenzyme A LigasesPhenylalanine Ammonia-LyasePlant ProteinsSalicylic Acid

Identifiers

PMID39692580
PMCPMC11708837

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.