Evidence map›Paper›PMID 39689273›Full record

ArticleJCO clinical cancer informatics2024

Implementing Cancer Registry Data With the PCORnet Common Data Model: The Greater Plains Collaborative Experience.

Bradley D McDowell, Michael A O'Rorke, Mary C Schroeder, Elizabeth A Chrischilles, Christine M Spinka, Lemuel R Waitman, Kelechi Anuforo, Alejandro Araya, Haddyjatou Bah, Jackson Barlocker and 18 more

Abstract read
In one paragraph

Article in JCO clinical cancer informatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Bradley D McDowellHolden Comprehensive Cancer Center, University of Iowa, Iowa City, IA.ORCID 0000-0001-8802-7686
Michael A O'RorkeDepartment of Epidemiology, University of Iowa, Iowa City, IA.ORCID 0000-0002-2425-3323
Mary C SchroederUniversity of Iowa, Iowa City, IA.ORCID 0000-0002-1043-8140
Elizabeth A ChrischillesDepartment of Epidemiology, University of Iowa, Iowa City, IA.ORCID 0000-0002-1843-1955
Christine M SpinkaUniversity of Missouri, Columbia, MO.ORCID 0000-0002-3869-9748
Lemuel R WaitmanUniversity of Missouri, Westwood Hills, KS.
Kelechi AnuforoKansas University Medical Center, Kansas City, KS.ORCID 0009-0006-4394-7730
Alejandro ArayaUniversity of Texas, Houston, TX.
Haddyjatou BahUniversity of Utah, Salt Lake City, UT.ORCID 0009-0003-6987-6297
Jackson BarlockerUniversity of Utah Health, Salt Lake City, UT.ORCID 0000-0002-2113-6228
Sravani ChandakaKansas University Medical Center, Kansas City, KS.
Lindsay G CowellO'Donnell School of Public Health, University of Texas Southwestern Medical Center, Dallas, TX.
Carol R GearyUniversity of Nebraska Medical Center, Omaha, NE.ORCID 0000-0003-1143-7147
Snehil GuptaWashington University, Saint Louis, MO.ORCID 0000-0001-5163-2196
Benjamin D HorneIntermountain Heart Institute, Intermountain Health, Salt Lake City, UT.ORCID 0000-0002-2656-0263
Boyd M KnospUniversity of Iowa, Iowa City, IA.ORCID 0000-0002-3834-3135
Albert M LaiWashington University, St Louis, MO.ORCID 0000-0002-9241-2656
Vasanthi MandhadiUniversity of Missouri, Columbia, MO.
Abu Saleh Mohammad MosaUniversity of Missouri, Columbia, MO.ORCID 0000-0002-8956-1466
Phillip ReederUniversity of Texas Southwestern Medical Center, Dallas, TX.
Giyung RyuInstitute for Clinical and Translational Science, University of Iowa, Iowa City, IA.
Brian ShukwitUniversity of Texas, Houston, TX.
Claire SmithAllina Health, Minneapolis, MN.
Alexander J StoddardMedical College of Wisconsin, Milwaukee, WI.
Mahanazuddin SyedDepartment of Population Health Sciences, University of Texas Science Center at San Antonio, San Antonio, TX.
Shorabuddin SyedUniversity of Texas Science Center at San Antonio, San Antonio, TX.ORCID 0000-0002-4761-5972
Bradley W TaylorMedical College of Wisconsin, Milwaukee, WI.ORCID 0000-0002-6414-4172
Jeffrey J VanWormerMarshfield Clinic Research Institute, Marshfield, WI.

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Jon C.D. Houtman · 2000 to 2026
$70.0M
Clinical and Translational Science AwardUL1TR001436 · NCATS · MEDICAL COLLEGE OF WISCONSIN · PI FREED, JULIE K · 2015 to 2025
$47.5M
Convalescent Plasma to Limit Coronavirus Associated ComplicationsUL1TR003167 · NCATS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KARP, DANIEL D, MCPHERSON, DAVID D · 2019 to 2023
$45.3M
University of Iowa Institute for Clinical and Translational ScienceUM1TR004403 · NCATS · UNIVERSITY OF IOWA · PI Marlan R Hansen, Patricia Winokur · 2023 to 2026
$16.1M
Building a patient-centered cancer data mart in a rural stateR50CA243692 · NCI · UNIVERSITY OF IOWA · PI MCDOWELL, BRADLEY D · 2019 to 2023
$490k
NCATS NIH HHS UL1 TR001436NCATS NIH HHS UL1 TR003167NCATS NIH HHS UM1 TR004403NCI NIH HHS P30 CA086862NCI NIH HHS R50 CA243692
6 · The paper itself

Abstract

purposeElectronic health records (EHRs) comprise a rich source of real-world data for cancer studies, but they often lack critical structured data elements such as diagnosis date and disease stage. Fortunately, such concepts are available from hospital cancer registries. We describe experiences from integrating cancer registry data with EHR and billing data in an interoperable data model across a multisite clinical research network.

methodsAfter sites implemented cancer registry data into a tumor table compatible with the PCORnet Common Data Model (CDM), distributed queries were performed to assess quality issues. After remediation of quality issues, another query produced descriptive frequencies of cancer types and demographic characteristics. This included linked BMI. We also report two current use cases of the new resource.

resultsEleven sites implemented the tumor table, yielding a resource with data for 572,902 tumors. Institutional and technical barriers were surmounted to accomplish this. Variations in racial and ethnic distributions across the sites were observed; the percent of tumors among Black patients ranged from <1% to 15% across sites, and the percent of tumors among Hispanic patients ranged from 1% to 46% across sites. Current use cases include a pragmatic prospective cohort study of a rare cancer and a retrospective cohort study leveraging body size and chemotherapy dosing.

conclusionIntegrating cancer registry data with the PCORnet CDM across multiple institutions creates a powerful resource for cancer studies. It provides a wider array of structured, cancer-relevant concepts, and it allows investigators to examine variability in those concepts across many treatment environments. Having the CDM tumor table in place enhances the impact of the network's effectiveness for real-world cancer research.

Indexed as

Electronic Health RecordsNeoplasmsRegistriesFemaleHumansMale

Identifiers

PMID39689273
PMCPMC11658786

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.