Evidence map›Paper›PMID 39684596›Full record

ArticleInternational journal of molecular sciences2024

Combined Metabolome and Transcriptome Analyses Reveals Anthocyanin Biosynthesis Profiles Between Purple and White Potatoes.

Miaomiao He, Xinping Ma, Yun Zhou, Fang Wang, Guonan Fang, Jian Wang

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Miaomiao HeAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Xinping MaAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Yun ZhouAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Fang WangAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Guonan FangAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.
Jian WangAcademy of Agriculture and Forestry Sciences, Qinghai University, Xining 810016, China.

Funding

Qinghai Province basic research program 2022-ZJ-712the earmarked fund for CARS-09
6 · The paper itself

Abstract

Colored potatoes with red and purple skin or flesh possess significant nutritional value and health benefits due to their rich anthocyanin content. To investigate the genetic mechanisms underlying color formation, the high-anthocyanin-content purple-skinned and purple-fleshed potato line 15-12-16, and the white-skinned and white-fleshed Xiazhai 65 variety were used for ultra-performance liquid chromatography-electrospray ionization-tandem mass spectrometry (UPLC-ESI-MS/MS) analysis, which was conducted to identify and quantify anthocyanins. RNA sequencing was performed to analyze the transcriptome. The results indicated a significant upregulation of genes within the anthocyanidin biosynthesis pathway in the purple potato, while these genes were either downregulated or absent in the white potato. The bHLH, MYB, and WRKY gene families exhibited a greater number of regulatory members, suggesting their pivotal role in color formation. Integrated analysis of the transcriptional and metabolic revealed that 12 differentially expressed genes (DEGs) related to the anthocyanidin biosynthetic had a significant correlation with 18 anthocyanin metabolites. Notably, the key gene

Indexed as

AnthocyaninsGene Expression ProfilingGene Expression Regulation, PlantMetabolomeSolanum tuberosumTranscriptomeBiosynthetic PathwaysPigmentationPlant ProteinsAnthocyaninsPlant ProteinsanthocyaninmetabolomepotatoSt5GTtranscriptome

Identifiers

PMID39684596
PMCPMC11641821

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.