Evidence map›Paper›PMID 39682742›Full record

ArticleCells2024

A High-Throughput Neurosphere-Based Colony Formation Assay to Test Drug and Radiation Sensitivity of Different Patient-Derived Glioblastoma Lines.

Manoj Kumar, Lauren C Nassour-Caswell, Hasan Alrefai, Joshua C Anderson, Taylor L Schanel, Patricia H Hicks, Rex Cardan, Christopher D Willey

Abstract read
In one paragraph

Article in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Manoj KumarDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.ORCID 0000-0001-7270-7898
Lauren C Nassour-CaswellDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.
Hasan AlrefaiDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.ORCID 0000-0002-7240-8748
Joshua C AndersonDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.
Taylor L SchanelDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.
Patricia H HicksDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.
Rex CardanDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.
Christopher D WilleyDepartment of Radiation Oncology, The University of Alabama at Birmingham, Birmingham, AL 35249, USA.ORCID 0000-0001-9953-0279

Funding

Glioblastoma tumor microenvironmental influence on acquired and inherent cancer therapy resistance.U01CA223976 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CHEN, JAKE YUE, CUI, XIANGQIN · 2018 to 2022
$4.8M
NCI NIH HHS U01 CA223976NIH HHS 3U01CA223976-05S1NIH HHS 5U01CA223976-05A1O'Neal Invests Young Supporters Board NextGen ScholarsVarian Medical Systems (United States) FLASH FORWARD
6 · The paper itself

Abstract

The gold standard assay for radiation response is the clonogenic assay, a normalized colony formation assay (CFA) that can capture a broad range of radiation-induced cell death mechanisms. Traditionally, this assay relies on two-dimensional (2D) cell culture conditions with colonies counted by fixing and staining protocols. While some groups have converted these to three-dimensional (3D) conditions, these models still utilize 2D-like media compositions containing serum that are incompatible with stem-like cell models such as brain tumor initiating cells (BTICs) that form self-aggregating spheroids in neural stem cell media. BTICs are the preferred patient-derived model system for studying glioblastoma (GBM) as they tend to better retain molecular and phenotypic characteristics of the original tumor tissue. As such, it is important that preclinical radiation studies should be adapted to BTIC conditions. In this study, we describe a series of experimental approaches for performing CFA experiments with BTIC cultures. Our results indicate that serum-free clonogenic assays are feasible for combination drug and radiation testing and may better facilitate translatability of preclinical findings.

Indexed as

GlioblastomaBrain NeoplasmsCell Line, TumorHigh-Throughput Screening AssaysHumansNeoplastic Stem CellsRadiation ToleranceSpheroids, CellularTumor Stem Cell Assaybrain tumor initiating cellsclonogenic assaycolony formation assayglioblastomapatient-derived cancer cellsradiation sensitivity

Identifiers

PMID39682742
PMCPMC11640616

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.