Evidence map›Paper›PMID 39682726›Full record

ArticleCells2024

Herpes Simplex Virus 1 Infection of Human Brain Organoids and Pancreatic Stem Cell-Islets Drives Organoid-Specific Transcripts Associated with Alzheimer's Disease and Autoimmune Diseases.

Jonathan Sundstrom, Emma Vanderleeden, Nathaniel J Barton, Sambra D Redick, Pepper Dawes, Liam F Murray, Meagan N Olson, Khanh Tran, Samantha M Chigas, Adrian R Orszulak and 8 more

Abstract read
In one paragraph

Article in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Jonathan SundstromDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Emma VanderleedenDepartment of Medicine, Diabetes Center of Excellence, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Nathaniel J BartonDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0002-0383-7741
Sambra D RedickProgram in Molecular Medicine, Diabetes Center of Excellence, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Pepper DawesDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Liam F MurrayDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Meagan N OlsonDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0003-3373-9488
Khanh TranDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Samantha M ChigasDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0003-1477-021X
Adrian R OrszulakDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0003-2358-5702
George M ChurchDepartment of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Benjamin ReadheadASU-Banner Neurodegenerative Disease Research Center, Arizona State University, Tempe, AZ 85281, USA.ORCID 0000-0003-4353-9965
Hyung Suk OhDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-1739-0389
David M HarlanDepartment of Medicine, Diabetes Center of Excellence, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0002-6938-8109
David M KnipeDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Jennifer P WangDepartment of Medicine, Diabetes Center of Excellence, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0002-2556-9100
Yingleong ChanDepartment of Neurology, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.
Elaine T LimDepartment of Medicine, Division of Innate Immunity, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA.ORCID 0000-0003-3651-0654

Funding

VIral and host mechanisms that tilt the HSV lytic/latent balanceP01AI098681 · NIAID · HARVARD MEDICAL SCHOOL · PI KNIPE, DAVID M. · 2013 to 2023
$19.2M
Identification of the genetic and transcriptomic networks of cognitive and neuropathological resilience to Alzheimer's Disease associated virusesU01AG061835 · NIA · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI READHEAD, BENJAMIN · 2018 to 2022
$6.5M
Transcriptomics-based identification of cell type specific host genes and gene networks perturbed by HSV-1 in cerebral organoids.R01AG083881 · NIA · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Teng-Ting Elaine Lim · 2024 to 2026
$2.5M
Examining the effect of cadmium metal exposure on Alzheimer's disease genetic alleles using herpes viral infected cerebral organoidsU01AG088673 · NIA · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Ying Leong Chan · 2024 to 2026
$2.5M
Breakthrough T1D COE-2020-967-M-NNIAID NIH HHS P01 AI098681NIA NIH HHS R01 AG083881NIA NIH HHS U01 AG061835NIA NIH HHS U01 AG088673NIH HHS P01AI09681NIH HHS R01AG083881NIH HHS U01AG061835NIH HHS U01AG088673
6 · The paper itself

Abstract

Viral infections leading to inflammation have been implicated in several common diseases, such as Alzheimer's disease (AD) and type 1 diabetes (T1D). Of note, herpes simplex virus 1 (HSV-1) has been reported to be associated with AD. We sought to identify the transcriptomic changes due to HSV-1 infection and anti-viral drug (acyclovir, ACV) treatment of HSV-1 infection in dissociated cells from human cerebral organoids (dcOrgs) versus stem cell-derived pancreatic islets (sc-islets) to gain potential biological insights into the relevance of HSV-1-induced inflammation in AD and T1D. We observed that differentially expressed genes (DEGs) in HSV-1-infected sc-islets were enriched for genes associated with several autoimmune diseases, most significantly, T1D, but also rheumatoid arthritis, psoriasis, Crohn's disease, and multiple sclerosis, whereas DEGs in HSV-1-infected dcOrgs were exclusively enriched for genes associated with AD. The ACV treatment of sc-islets was not as effective in rescuing transcript perturbations of autoimmune disease-associated genes. Finally, we identified gene ontology categories that were enriched for DEGs that were in common across, or unique to, viral treatment of dcOrgs and sc-islets, such as categories involved in the transferase complex, mitochondrial, and autophagy function. In addition, we compared transcriptomic signatures from HSV-1-infected sc-islets with sc-islets that were infected with the coxsackie B virus (CVB) that had been associated with T1D pathogenesis. Collectively, this study provides tissue-specific insights into the molecular effects of inflammation in AD and T1D.

Indexed as

Alzheimer DiseaseBrainHerpesvirus 1, HumanOrganoidsAutoimmune DiseasesDiabetes Mellitus, Type 1Herpes SimplexHumansIslets of LangerhansStem CellsTranscriptomeacyclovirAlzheimer’s diseaseautoimmune diseasescerebral organoidsherpes simplex virus 1innate immuneneurodegenerative diseasesstem cell isletstype 1 diabetes

Identifiers

PMID39682726
PMCPMC11640215

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.