Evidence map›Paper›PMID 39682150›Full record

ArticleCancers2024

Mechanism of miRNAs and miRNA-mRNA Regulatory Networks in Modulating Drug Resistance in HER2-Positive Breast Cancer: An Integrative Bioinformatics Approach.

Thanh Hoa Vo, Edel A McNeela, Orla O'Donovan, Sweta Rani, Jai Prakash Mehta

Abstract read
In one paragraph

Article in Cancers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Thanh Hoa VoPharmaceutical and Molecular Biotechnology Research Center (PMBRC), Department of Science, South East Technological University, X91 K0EK Waterford, Ireland.
Edel A McNeelaPharmaceutical and Molecular Biotechnology Research Center (PMBRC), Department of Science, South East Technological University, X91 K0EK Waterford, Ireland.
Orla O'DonovanPharmaceutical and Molecular Biotechnology Research Center (PMBRC), Department of Science, South East Technological University, X91 K0EK Waterford, Ireland.ORCID 0000-0003-3980-8835
Sweta RaniPharmaceutical and Molecular Biotechnology Research Center (PMBRC), Department of Science, South East Technological University, X91 K0EK Waterford, Ireland.ORCID 0000-0003-0937-0094
Jai Prakash MehtaDepartment of Applied Science, South East Technological University, R93 V960 Carlow, Ireland.ORCID 0000-0002-4255-0516

Funding

South East Technological University WD-2022-14-WSCH
6 · The paper itself

Abstract

backgroundHER2-positive breast cancer is an aggressive subtype where innate/acquired resistance to targeted drugs remains a challenge. This study aims to uncover the underlying mechanisms of HER2 drug resistance through miRNA analysis and target identification.

methodsMiRNA datasets were systematically retrieved from the GEO database, and differential expression analysis was conducted for both miRNA and mRNA datasets. Functional analyses were also conducted to validate the identified miRNAs and assess their clinical relevance.

resultsWe identified 113 differentially expressed miRNAs (DEMs) and 923 target genes. Validation was performed using external mRNA datasets, and intersection with significant genes identified 110 overlapping genes associated with HER2 drug resistance. Further analyses included functional enrichment, construction of a protein-protein interaction (PPI) network, identification of key hub genes such as BCL2, FOS, and CXCR4, and assessment of clinical relevance through survival analysis and immunohistochemistry (IHC) assessments.

conclusionsThis integrative approach unveils a complex landscape of HER2 drug resistance in breast cancer, identifying crucial miRNAs, target genes, and significant pathways. The findings offer novel insights into the mechanisms governing drug resistance and highlight the potential for enhancing therapeutic strategies. Future studies are necessary for experimental validation to further explore the complex mechanisms involved.

Indexed as

bioinformaticsdrug resistanceHER2-positive breast cancerHER2 targeted therapymiRNAstreatment response

Identifiers

PMID39682150
PMCPMC11640410

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.