Evidence map›Paper›PMID 39681568›Full record

ArticleNature communications2024

Pathobiont-induced suppressive immune imprints thwart T cell vaccine responses.

Irshad Ahmed Hajam, Chih-Ming Tsai, Cesia Gonzalez, Juan Raphael Caldera, María Lázaro Díez, Xin Du, April Aralar, Brian Lin, William Duong, George Y Liu

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Research progress on T-cell responses inFrontiers in microbiology · 2026
    Pooled it
  2. Circulating T-cell phenotypes are influenced by prior Staphylococcus aureus exposure in hemodialysis patients.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  3. Conserved CD4Nature microbiology · 2026
    Article
  4. Review
  5. Novel Swelling-Lytic Cell Death Triggered by Cargo-Free Ionizable Lipid Nanoparticles.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Irshad Ahmed HajamDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0000-0003-4010-1845
Chih-Ming TsaiDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.
Cesia GonzalezDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.
Juan Raphael CalderaDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0000-0003-0563-8815
María Lázaro DíezDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0000-0002-6098-8052
Xin DuDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0000-0002-6907-3609
April AralarDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0000-0002-2944-3417
Brian LinDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.ORCID 0009-0005-9482-416X
William DuongDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA.
George Y LiuDepartment of Pediatrics, University of California San Diego, San Diego, CA, 92093, USA. gyliu@health.ucsd.edu.ORCID 0000-0003-0759-0587

Funding

RESEARCH IN INFECTIOUS DISEASEST32AI007036 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIZET, VICTOR · 1985 to 2025
$9.2M
Interrogating human anti-staphylococcal antibody responses for S. aureus vaccine insightsR01AI181321 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Clarence Buddy Creech, George Y Liu · 2023 to 2026
$3.2M
Generating protective immunity to Staphylococcus aureusR01AI127406 · NIAID · CEDARS-SINAI MEDICAL CENTER · PI LIU, GEORGE Y, MARTINS, GISLAINE A · 2017 to 2021
$2.8M
Staphylococcus aureus interference with IsdB vaccinationR01AI144694 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LIU, GEORGE Y · 2019 to 2023
$2.8M
Mechanisms of vaccine interference by S. aureus-induced imprintsR01AI179098 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI George Y Liu · 2024 to 2026
$2.2M
NIAID NIH HHS R01 AI127406NIAID NIH HHS R01 AI144694NIAID NIH HHS R01 AI179098NIAID NIH HHS R01 AI181321NIAID NIH HHS T32 AI007036U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI127406U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI144694U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI179098U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI181321
6 · The paper itself

Abstract

Pathobionts have evolved many strategies to coexist with the host, but how immune evasion mechanisms contribute to the difficulty of developing vaccines against pathobionts is unclear. Meanwhile, Staphylococcus aureus (SA) has resisted human vaccine development to date. Here we show that prior SA exposure induces non-protective CD4

Indexed as

CD4-Positive T-LymphocytesInterleukin-10Interleukin-17Staphylococcal InfectionsStaphylococcus aureusAnimalsFemaleHumansImmune EvasionInterferon-gammaMiceMice, Inbred C57BLReceptors, Interleukin-10Staphylococcal VaccinesVaccinationIL10 protein, mouseInterferon-gammaInterleukin-10Interleukin-17Receptors, Interleukin-10Staphylococcal Vaccines

Identifiers

PMID39681568
PMCPMC11649901

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.