Evidence map›Paper›PMID 39681187›Full record

ArticleMicrobes and infection

Endogenous retroelement expression in modeled airway epithelial repair.

Stephanie Michael, Nicholas Liotta, Tongyi Fei, Matthew L Bendall, Douglas F Nixon, Nicholas Dopkins

Abstract read
In one paragraph

Article in Microbes and infection. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Stephanie MichaelDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Nicholas LiottaDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Tongyi FeiDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Matthew L BendallDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Douglas F NixonDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Nicholas DopkinsDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY, USA. Electronic address: nid4009@med.cornell.edu.

Funding

HOPE - HIV Obstruction by Programmed EpigeneticsUM1AI164559 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI Lishomwa C Ndhlovu, Melanie Maria Ott · 2021 to 2026
$32.2M
Regulatory Crosstalk Between Human Endogenous Retroviruses, HIV, and EBV, in LymphomaR01CA260691 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL, NIXON, DOUGLAS F · 2021 to 2025
$5.8M
NCI NIH HHS R01 CA260691NIAID NIH HHS UM1 AI164559
6 · The paper itself

Abstract

Cystic fibrosis (CF) is an autosomal recessive genetic disorder characterized by impairment of the CF transmembrane conductance regulator (CFTR) via gene mutation. CFTR is expressed at the cellular membrane of epithelial cells and functions as an anion pump which maintains water and salt ion homeostasis. In pulmonary airways of CF patients, pathogens such as P. aeruginosa and subsequent uncontrolled inflammation damage the human airway epithelial cells (HAECs) and can be life-threatening. We previously identified that inhibiting endogenous retroelement (ERE) reverse transcriptase can hamper the inflammatory response to bacterial flagella in THP-1 cells. Here, we investigate how ERE expression is sensitive to HAEC repair and toll-like receptor 5 (TLR5) activation, a primary mechanism by which inflammation impacts disease outcome. Our results demonstrate that several human endogenous retroviruses (HERVs) and long interspersed nuclear elements (LINEs) fluctuate throughout the various stages of repair and that TLR5 activation further influences ERE expression. By considering the impact of the most common CF mutation F508del/F508del on ERE expression in unwounded HAECs, we also found that two specific EREs, L1FLnI_2p23.1c and HERVH_10p12.33, were downregulated in CF-derived HAECs. Collectively, we show that ERE expression in HAECs is sensitive to certain modalities reflective of CF pathogenesis, and specific EREs may be indicative of CF disease state and pathogenesis.

Indexed as

Cystic FibrosisEndogenous RetrovirusesEpithelial CellsRespiratory MucosaRetroelementsCell LineCystic Fibrosis Transmembrane Conductance RegulatorHumansLong Interspersed Nucleotide ElementsPseudomonas aeruginosaToll-Like Receptor 5CFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorRetroelementsTLR5 protein, humanToll-Like Receptor 5Airway epitheliumEndogenous retroelement (ERE)FlagellaHuman endogenous retrovirus (HERV)Long interspersed nuclear element type 1 (LINE1)

Identifiers

PMID39681187
PMCPMC12167390

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.