Evidence map›Paper›PMID 39679637›Full record

ArticleAnalytical chemistry2024

Cyclic Olefin Copolymer-Based Fixed-Target Sample Delivery Device for Protein X-ray Crystallography.

Abhik Manna, Mukul Sonker, Domin Koh, Michael Steiger, Adil Ansari, Hao Hu, Isabel Quereda-Moraleda, Alice Grieco, Diandra Doppler, Daniele de Sanctis and 6 more

Abstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Abhik MannaSchool of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Mukul SonkerSchool of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Domin KohSchool of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Michael SteigerCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona 85287, United States.
Adil AnsariCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona 85287, United States.
Hao HuCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona 85287, United States.
Isabel Quereda-MoraledaDepartment of Crystallography and Structural Biology, Institute of Physical Chemistry Blas Cabrera, Spanish National Research Council (CSIC), Madrid 28006, Spain.
Alice GriecoDepartment of Crystallography and Structural Biology, Institute of Physical Chemistry Blas Cabrera, Spanish National Research Council (CSIC), Madrid 28006, Spain.
Diandra DopplerSchool of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.
Daniele de SanctisESRF─The European Synchrotron, P.O. Box 38000 Grenoble, France.
Shibom BasuEuropean Molecular Biology Laboratory, 38042 Grenoble, France.
Julien OrlansESRF─The European Synchrotron, P.O. Box 38000 Grenoble, France.
Samuel L RoseESRF─The European Synchrotron, P.O. Box 38000 Grenoble, France.ORCID 0000-0003-4824-4066
Sabine BothaCenter for Applied Structural Discovery, The Biodesign Institute, Arizona State University, Tempe, Arizona 85287, United States.
Jose Manuel Martin-GarciaDepartment of Crystallography and Structural Biology, Institute of Physical Chemistry Blas Cabrera, Spanish National Research Council (CSIC), Madrid 28006, Spain.
Alexandra RosSchool of Molecular Sciences, Arizona State University, Tempe, Arizona 85287, United States.ORCID 0000-0001-7709-8331

Funding

Femtosecond nano-crystallography of membrane proteinsR01GM095583 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI FROMME, PETRA · 2010 to 2023
$4.3M
NIGMS NIH HHS R01 GM095583
6 · The paper itself

Abstract

Serial macromolecular X-ray crystallography plays an important role in elucidating protein structures and consequently progressing the field of targeted therapeutics. The use of pulsed beams at different repetition frequencies requires the development of various sample-conserving injection strategies to minimize sample wastage between X-ray exposures. Fixed-target sample delivery methods that use solid support to hold the crystals in the X-ray beam path are gaining interest as a sample-conserving delivery system for X-ray crystallography with high crystal hit rates. Here, we present a novel fixed-target microfluidic system for delivering protein microcrystals to X-ray beams for diffraction data collection and structure determination. The fixed-target design consists of 3 symmetric sections arranged in an area of 1 in. × 1 in. with up to 18,000 crystal traps per device. Each trap is targeted to hold one crystal up to 50 μm in size in the largest dimension. The device has been fabricated using cyclic olefin copolymer (COC) for high-quality diffraction data collection with low background scattering induced through the fixed-target material. The newly developed fixed-target device is designed for vacuum compatibility which will enable the use in vacuum experimental chambers of X-ray radiation sources including the newly developed, first-of-its-kind compact X-ray light source (CXLS), which is currently in commissioning at Arizona State University. To assess the validity of the COC device, serial crystallography experiments were performed on the model protein lysozyme at the new European Synchrotron Radiation Facility-Extremely Brilliant Source (ESRF-EBS) beamline ID29. A 1.6 Å crystal structure of the protein was solved, demonstrating that, in general, the COC device can be used to generate high-quality data from macromolecular crystals at the CXLS and synchrotron radiation sources, which holds enormous potential for advancing the field of protein structure determination by fixed-target X-ray crystallography.

Indexed as

CycloparaffinsMuramidasePolymersProteinsCrystallography, X-RayCycloparaffinsMuramidasePolymersProteins

Identifiers

PMID39679637
PMCPMC11696833

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.