Evidence map›Paper›PMID 39679410›Full record

ArticleBiomedical optics express2024

Spatial polarimetric second harmonic generation evaluation of collagen in a hypophosphatasia mouse model.

Tianyi Zheng, Emily G Pendleton, Ruth P Barrow, Ana D Maslesa, Peter A Kner, Luke J Mortensen

Abstract read
In one paragraph

Article in Biomedical optics express, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Biomedical optics express · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tianyi ZhengSchool of Electrical and Computer Engineering, University of Georgia, Athens, GA 30602, USA.
Emily G PendletonRegenerative Bioscience Center, Rhodes Center for ADS, University of Georgia, Athens, GA 30602, USA.ORCID https://orcid.org/0000-0002-2487-1009
Ruth P BarrowRegenerative Bioscience Center, Rhodes Center for ADS, University of Georgia, Athens, GA 30602, USA.
Ana D MaslesaRegenerative Bioscience Center, Rhodes Center for ADS, University of Georgia, Athens, GA 30602, USA.
Peter A KnerSchool of Electrical and Computer Engineering, University of Georgia, Athens, GA 30602, USA.ORCID https://orcid.org/0000-0001-7555-5180
Luke J MortensenRegenerative Bioscience Center, Rhodes Center for ADS, University of Georgia, Athens, GA 30602, USA.ORCID https://orcid.org/0000-0002-4331-4099

Funding

Super resolution label-free imaging in highly scattering boneR21EB027802 · NIBIB · UNIVERSITY OF GEORGIA · PI MORTENSEN, LUKE J. · 2019 to 2021
$568k
NIBIB NIH HHS R21 EB027802
6 · The paper itself

Abstract

Polarization-resolved second harmonic generation (pSHG) is a label-free method that has been used in a range of tissue types to describe collagen orientation. In this work, we develop pSHG analysis techniques for investigating cranial bone collagen assembly defects occurring in a mouse model of hypophosphatasia (HPP), a metabolic bone disease characterized by a lack of bone mineralization. After observing differences in bone collagen lamellar sheet structures using scanning electron microscopy, we found similar alterations with pSHG between the healthy and HPP mouse collagen lamellar sheet organization. We then developed a spatial polarimetric gray-level co-occurrence matrix (spGLCM) method to explore polarization-mediated textural differences in the bone collagen mesh. We used our spGLCM method to describe the collagen organizational differences between HPP and healthy bone along the polarimetric axis that may be caused by poorly aligned collagen molecules and a reduction in collagen density. Finally, we applied machine learning classifiers to predict bone disease state using pSHG imaging and spGLCM methods. Comparing random forest (RF) and XGBoost technique on spGLCM, we were able to accurately separate unknown images from the two groups with an averaged F1 score of 92.30%±3.11% by using RF. Our strategy could potentially allow for monitoring of therapeutic efficacy and disease progression in HPP, or even be extended to other collagen-related ailments or tissues.

Identifiers

PMID39679410
PMCPMC11640570

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.