Evidence map›Paper›PMID 39678885›Full record

ArticleJournal of thoracic disease2024

Transcriptome sequencing analysis reveals the molecular mechanism of sepsis-induced muscle atrophy.

Dajun Yan, Jie Zhang, Wenxiao Yan, Fengxiaorui Song, Xinye Luo, Hua Miao, Nuerlangbaike Nuerxiati, Talaibaike Maimaijuma, Xianggui Xu, Guiwen Liang and 3 more

Abstract read
In one paragraph

Article in Journal of thoracic disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Dajun Yan *Department of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Jie Zhang *Department of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Wenxiao Yan *Department of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Fengxiaorui SongSchool of Imaging, Xuzhou Medical University, Xuzhou, China.
Xinye LuoDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Hua MiaoDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Nuerlangbaike NuerxiatiDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Talaibaike MaimaijumaDepartment of Emergency Medicine, Kizilsu Kirghiz Autonomous Prefecture People's Hospital, Kezhou, China.
Xianggui XuDepartment of Emergency Medicine, Kizilsu Kirghiz Autonomous Prefecture People's Hospital, Kezhou, China.
Guiwen LiangDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Zhongwei HuangDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Haiyan JiangDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.
Lei QiDepartment of Emergency Medicine, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Sepsis-induced skeletal muscle atrophy is accompanied by complex physiological and biochemical changes that negatively affect clinical outcomes, lead to prolonged hospitalization, and even increase mortality. However, few studies have been performed on the mechanisms of the disease, and effective treatments are still lacking. This study is aimed to research the molecular mechanisms of sepsis-induced skeletal muscle atrophy and to develop new therapeutic strategies. Methods: In this study, we first constructed a mouse model of sepsis after cecal ligation and puncture (CLP). At 12, 24, 48, and 72 hours after modeling, we then analyzed the differentially expressed genes (DEGs) in the tibialis anterior muscle using transcriptome sequencing technology. Results: The results showed that tibialis anterior muscle atrophy exacerbated with time after CLP and was accompanied by the altered expression of a large number of genes. The expression profiling analysis showed that there were three transcriptional phases within 72 hours of surgery: transcriptional phase I (0-12 hours), transcriptional phase II (24 hours), and transcriptional phase III (48-72 hours), of which 24 hours may be the critical time point for muscle atrophy. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses showed that the upregulated genes were mainly involved in inflammatory immunity, proteolysis, apoptosis, and autophagy, while the downregulated genes were mainly involved in cell proliferation and protein synthesis. These three transcriptional phases were defined as the inflammatory-immune phase, inflammatory-atrophy phase, and atrophy phase, respectively. Conclusions: These findings not only enrich understandings of the molecular mechanism of sepsis-induced skeletal muscle atrophy, but also provide a scientific basis for its targeted therapy.

Indexed as

molecular mechanismmuscle atrophySepsis

Identifiers

PMID39678885
PMCPMC11635243

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.