Evidence map›Paper›PMID 39678866›Full record

ArticleJournal of thoracic disease2024

Predicting prognosis in lung adenocarcinoma by predicting TIGIT expression: a pathomics model.

Peihong Hu, Bo Tian, Hang Gu, Haoran Liu, Qiang Li

Erratum issuedAbstract read
In one paragraph

Article in Journal of thoracic disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Peihong Hu *Department of Thoracic Surgery, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, Affiliated Cancer Hospital of University of Electronic Science and Technology of China, Chengdu, China.
Bo Tian *Department of Thoracic Surgery, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, Affiliated Cancer Hospital of University of Electronic Science and Technology of China, Chengdu, China.
Hang GuDepartment of Thoracic Surgery, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, Affiliated Cancer Hospital of University of Electronic Science and Technology of China, Chengdu, China.
Haoran LiuDepartment of Thoracic Surgery, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, Affiliated Cancer Hospital of University of Electronic Science and Technology of China, Chengdu, China.
Qiang LiDepartment of Thoracic Surgery, Sichuan Clinical Research Center for Cancer, Sichuan Cancer Hospital & Institute, Sichuan Cancer Center, Affiliated Cancer Hospital of University of Electronic Science and Technology of China, Chengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Traditional diagnostic methods have limited efficacy in predicting the prognosis of lung adenocarcinoma (LUAD), T cell immunoreceptor with immunoglobulin and immunoreceptor tyrosine-based inhibitory motif domain (TIGIT) is a new biomarker. This study aimed to evaluate TIGIT expression as a LUAD biomarker and predict patient prognosis using a pathological feature model. Methods: Clinical data and pathological images from The Cancer Genome Atlas (TCGA) were analyzed. The prognostic value of TIGIT was verified by genetic prognostic analysis and gene set enrichment analysis (GSEA). The OTSU algorithm was used to segment LUAD pathological images, and features were extracted using the PyRadiomics package and standardized with z-scores. Feature selection was performed using min-redundancy, recursive feature elimination (RFE) and stepwise regression algorithms, and a logistic regression algorithm was used to establish the pathomics model. Receiver operating characteristics, calibration, and decision curves were used for model evaluation. The pathomics score (PS) was used to predict TIGIT gene expression and analyze prognostic value and pathological mechanisms through Spearman correlation. Results: The study included 443 clinical samples and 327 pathological images. Prognostic analysis showed significantly higher TIGIT expression in tumor tissues (P<0.001), with TIGIT being a protective factor for overall survival (OS) in LUAD [hazard ratio (HR) =0.65; 95% confidence interval (CI): 0.44-0.95; P=0.03]. GSEA revealed significant enrichment of differentially expressed genes in the TGF-β and MAPK signaling pathways. From 465 pathological features, the four best features were selected to construct a pathomics model with good predictive performance. Higher PS values were observed in the TIGIT high-expression group, correlating with improved OS (P=0.009). PS was positively correlated with the epithelial-mesenchymal transition related (EMT-related) genes ( Conclusions: TIGIT expression is significantly correlated with LUAD prognosis and can effectively predict patient outcomes.

Indexed as

lung adenocarcinoma (LUAD)mechanisms of pathologypathomicsprognostic modelT cell immunoreceptor with immunoglobulin and immunoreceptor tyrosine-based inhibitory motif domain (TIGIT)

Identifiers

PMID39678866
PMCPMC11635229

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.