Evidence map›Paper›PMID 39677361›Full record

ArticlePNAS nexus2024

Spatial organization and stochastic fluctuations of immune cells impact clinical responsiveness to immunotherapy in melanoma patients.

Giuseppe Giuliani, William Stewart, Zihai Li, Ciriyam Jayaprakash, Jayajit Das

Abstract read
In one paragraph

Article in PNAS nexus, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Giuseppe GiulianiDepartment of Physics, The Ohio State University, Columbus, OH 43210, USA.ORCID https://orcid.org/0009-0005-5832-7430
William StewartGIG Statistical Consulting, LLC, Columbus, OH 43205, USA.ORCID https://orcid.org/0000-0002-6153-6613
Zihai LiPelotonia Institute for Immuno-Oncology, The Ohio State University, Columbus, OH 43210, USA.ORCID https://orcid.org/0000-0003-4603-927X
Ciriyam JayaprakashDepartment of Physics, The Ohio State University, Columbus, OH 43210, USA.ORCID https://orcid.org/0000-0001-6134-7938
Jayajit DasSteve and Cindy Rasmussen Institute for Genomic Medicine, Nationwide Children's Hospital, Columbus, OH 43205, USA.ORCID https://orcid.org/0000-0001-9649-4698

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-dimensional, spatial single-cell technologies, such as CyTOF imaging mass cytometry (IMC), provide detailed information regarding locations of a large variety of cancer and immune cells in microscopic scales in tumor microarray slides obtained from patients prior to immune checkpoint inhibitor (ICI) therapy. An important question is how the initial spatial organization of these cells in the tumor microenvironment (TME) changes with time and regulates tumor growth and eventually outcomes as patients undergo ICI therapy. Utilizing IMC data of melanomas of patients who later underwent ICI therapy, we develop a spatially resolved interacting cell system model that is calibrated against patient response data to address the above question. We find that the tumor fate in these patients is determined by the spatial organization of activated CD8

Indexed as

imaging mass cytometrymechanistic modelingmelanomastochastic fluctuations

Identifiers

PMID39677361
PMCPMC11642613

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.