Evidence map›Paper›PMID 39673798›Full record

ArticleNucleic acids research2025

The phage protein paratox is a multifunctional metabolic regulator of Streptococcus.

Tasneem Hassan Muna, Nicole R Rutbeek, Julia Horne, Ying W Lao, Oleg V Krokhin, Gerd Prehna

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tasneem Hassan MunaDepartment of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada.ORCID 0009-0009-7850-8393
Nicole R RutbeekDepartment of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada.ORCID 0000-0002-6851-8223
Julia HorneDepartment of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada.
Ying W LaoManitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 John Buhler Research Centre, 715 McDermot Avenue, Winnipeg MB, R3E 3P4, Canada.
Oleg V KrokhinManitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 John Buhler Research Centre, 715 McDermot Avenue, Winnipeg MB, R3E 3P4, Canada.ORCID 0000-0002-9989-6593
Gerd PrehnaDepartment of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada.ORCID 0000-0001-5539-7533

Funding

Canadian Foundation for Innovation 37841Manitoba Medical Service Foundation 8-2020-10Natural Sciences and Engineering Research Council of Canada RGPIN-2018-04968NSERC RGPIN-2022-05015University of Manitoba
6 · The paper itself

Abstract

Streptococcus pyogenes, or Group A Streptococcus (GAS), is a commensal bacteria and human pathogen. Central to GAS pathogenesis is the presence of prophage encoded virulence genes. The conserved phage gene for the protein paratox (Prx) is genetically linked to virulence genes, but the reason for this linkage is unknown. Prx inhibits GAS quorum sensing and natural competence by binding the transcription factor ComR. However, inhibiting ComR does not explain the virulence gene linkage. To address this, we took a mass spectrometry approach to search for other Prx interaction partners. The data demonstrates that Prx binds numerous DNA-binding proteins and transcriptional regulators. We show binding of Prx in vitro with the GAS protein Esub1 (SpyM3_0890) and the phage protein JM3 (SpyM3_1246). An Esub1:Prx complex X-ray crystal structure reveals that Esub1 and ComR possess a conserved Prx-binding helix. Computational modelling predicts that the Prx-binding helix is present in several, but not all, binding partners. Namely, JM3 lacks the Prx-binding helix. As Prx is conformationally dynamic, this suggests partner-dependent binding modes. Overall, Prx acts as a metabolic regulator of GAS to maintain the phage genome. As such, Prx maybe a direct contributor to the pathogenic conversion of GAS.

Indexed as

Bacterial ProteinsStreptococcus pyogenesViral ProteinsCrystallography, X-RayDNA-Binding ProteinsModels, MolecularProtein BindingStreptococcus PhagesBacterial ProteinsDNA-Binding ProteinsViral Proteins

Identifiers

PMID39673798
PMCPMC11754733

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.