Evidence map›Paper›PMID 39673746›Full record

Observational studyJournal of Crohn's & colitis2025

Open Label Vancomycin in Primary Sclerosing Cholangitis-Inflammatory Bowel Disease: Improved Colonic Disease Activity and Associations With Changes in Host-Microbiome-Metabolomic Signatures.

Mohammed Nabil Quraishi, Jonathan Cheesbrough, Peter Rimmer, Benjamin H Mullish, Naveen Sharma, Elena Efstathiou, Animesh Acharjee, Georgios Gkoutus, Arzoo Patel, Julian R Marchesi and 14 more

Registry-linked trialAbstract readObservational Study
In one paragraph

Observational study in Journal of Crohn's & colitis, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05376228 (A Systems Biology Approach for Identification of Host and Microbial Mechanisms and Druggable Targets for the Treatment of PSC-IBD), which is not on this map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05376228 unknown statusnot on this map

A Systems Biology Approach for Identification of Host and Microbial Mechanisms and Druggable Targets for the Treatment of PSC-IBD

TypeobservationalSponsorUniversity Hospital Birmingham NHS Foundation TrustRan2022 to 2023Enrolled15ConditionsInflammatory Bowel Diseases, Primary Sclerosing CholangitisArmsOral Vancomycin
3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. [Are antibiotics immunomodulators? An attempt to use vancomycin in the treatment of primary sclerosing cholangitis].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2025
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Mohammed Nabil QuraishiDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.ORCID 0000-0003-2338-8397
Jonathan CheesbroughDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.
Peter RimmerDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.
Benjamin H MullishDivision of Digestive Diseases, Department of Metabolism, Digestion and Reproduction, Faculty of Medicine, Imperial College London, London, UK.ORCID 0000-0001-6300-3100
Naveen SharmaDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.
Elena EfstathiouInstitute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, UK.
Animesh AcharjeeInstitute of Translational Medicine, University Hospitals Birmingham, Birmingham, UK.ORCID 0000-0003-2735-7010
Georgios GkoutusInstitute of Translational Medicine, University Hospitals Birmingham, Birmingham, UK.
Arzoo PatelLiver Unit, University Hospitals Birmingham, Birmingham, UK.
Julian R MarchesiDepartment of Gastroenterology, Inflammatory Bowel Disease Center, Sheikh Shakhbout Medical City, Abu Dhabi, UAE.
Stephane CamuzeauxMRC Health Data Research UK (HDR UK), Birmingham, UK.
Katie ChappellMRC Health Data Research UK (HDR UK), Birmingham, UK.
Maria A Valdivia-GarciaDepartment of Metabolism, Digestion and Reproduction, National Phenome Centre and Imperial Clinical Phenotyping Centre, Section of Bioanalytical Chemistry, IRDB Building, Imperial College London, London, UK.
James FergusonLiver Unit, University Hospitals Birmingham, Birmingham, UK.
Matthew J BrookesDepartment of Gastroenterology, University of Wolverhampton, Wolverhampton, UK.
Martine WalmsleyPSC Support, Oxford, UK.
Amanda E RossiterInstitute of Microbiology and Infection, University of Birmingham, UK.
Willem van SchaikInstitute of Microbiology and Infection, University of Birmingham, UK.
Ross S McInnesInstitute of Microbiology and Infection, University of Birmingham, UK.
Rachel CooneyDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.
Michael TraunerHans Popper Laboratory of Molecular Hepatology, Division of Gastroenterology and Hepatology, Department of Internal Medicine III, Medical University of Vienna, Vienna, Austria.
Andrew D BeggsInstitute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, UK.ORCID 0000-0003-0784-2967
Tariq H IqbalDepartment of Gastroenterology, University Hospitals Birmingham, Birmingham, UK.
Palak J TrivediLiver Unit, University Hospitals Birmingham, Birmingham, UK.

Funding

Imperial Biomedical Research CentreMedical Research CouncilNational Institute for Health ResearchNational Institute for Health Research MC_PC_12025UK Consortium for MetAbolic Phenotyping
6 · The paper itself

Abstract

backgroundWe conducted a single-arm interventional study, to explore mucosal changes associated with clinical remission under oral vancomycin (OV) treatment, in primary sclerosing cholangitis-associated inflammatory bowel disease (PSC-IBD); NCT05376228.

methodsFifteen patients with PSC and active colitis (median fecal calprotectin 459 µg/g; median total Mayo score 5) were treated with OV (125 mg QID) for 4 weeks and followed-up for a further 4 weeks of treatment withdrawal (8 weeks, end-of-study). Colonic biopsies were obtained at baseline and Week 4. Clinical assessments, and serum and stool samples (metagenomics, metatranscriptomics, and metabolomics) were collected at Weeks 0, 2, 4, and 8. The primary efficacy outcome measure was the induction of clinical remission.

resultsOral vancomycin resulted in clinical remission in 12/15 patients and significant reductions in fecal calprotectin. Oral vancomycin was associated with reduced abundances of Lachnospiraceae, genera Blautia and Bacteroides; and enrichment of Enterobacteriaceae, and genera Veillonella, Akkermansia, and Escherichia. Oral vancomycin treatment was associated with the downregulation of multiple metatranscriptomic pathways (including short-chain fatty acid [SCFA] metabolism and bile acid [BA] biotransformation), along with host genes and multiple pathways involved in inflammatory responses and antimicrobial defence; and an upregulation of genes associated with extracellular matrix repair. Oral vancomycin use resulted in the loss of specific fecal SCFAs and secondary BAs, including lithocholic acid derivatives. Colitis activity relapsed following OV withdrawal, with host mucosal and microbial changes trending toward baseline.

conclusionsFour weeks of OV induces remission in PSC-IBD activity, associated with a reduction in gut bacterial diversity and compositional changes relating to BA and SCFA homeostasis.

Indexed as

Anti-Bacterial AgentsCholangitis, SclerosingColitisGastrointestinal MicrobiomeInflammatory Bowel DiseasesVancomycinAdministration, OralAdultColonFecesFemaleHumansLeukocyte L1 Antigen ComplexMaleMetabolomicsMiddle AgedAnti-Bacterial AgentsLeukocyte L1 Antigen ComplexVancomycininflammatory bowel diseasePrimary sclerosing cholangitisvancomycin

Identifiers

PMID39673746
PMCPMC11831226

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.