Evidence map›Paper›PMID 39673734›Full record

ArticleThe Plant journal : for cell and molecular biology2025

The rise of CLAVATA: evidence for CLAVATA3 and WOX signaling in the fern gametophyte.

Kelley A Renninger, Rebekah M Yarvis, Christopher E Youngstrom, Chi-Lien Cheng

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Article in The Plant journal : for cell and molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kelley A RenningerDepartment of Biology, University of Iowa, Iowa City, Iowa, 52242, USA.
Rebekah M YarvisDepartment of Biology, University of Iowa, Iowa City, Iowa, 52242, USA.
Christopher E YoungstromDepartment of Biology, University of Iowa, Iowa City, Iowa, 52242, USA.
Chi-Lien ChengDepartment of Biology, University of Iowa, Iowa City, Iowa, 52242, USA.ORCID 0000-0003-3188-047X

Funding

Avis Cone Undergraduate Research FellowshipBallard and Seashore Dissertation FellowshipKollros Graduate FundLinda and Rick Maxson Undergraduate Research AwardNational Science Foundation 1555487National Science Foundation 2423834UI Graduate College Summer FellowshipUniversity of Iowa (UI) Graduate College Post-Comps Fellowship
6 · The paper itself

Abstract

CLAVATA3/EMBRYO SURROUNDING REGION (CLE) peptides are 12-13 amino acid-long peptides that serve as positional signals in plants. The core CLE signaling module consists of a CLE peptide and a leucine-rich repeat receptor-like kinase, but in flowering plants, WUSCHEL-RELATED HOMEOBOX (WOX) transcription factors are also incorporated to form negative feedback loops that regulate stem cell maintenance in the shoot and root. It is not known when WOX genes were co-opted into CLE signaling pathways, only that mosses and liverworts do not require WOX for CLE-regulated stem cell activities. We identified 11 CLE-encoding genes in the Ceratopteris genome, including one (CrCLV3) most similar to shoot meristem CLE peptide CLAVATA3. We performed the first functional characterization of a fern CLE using techniques including RNAi knockdown and synthetic peptide dosage. We found that CrCLV3 promotes cell proliferation and stem cell identity in the gametophyte meristem. Importantly, we provide evidence for CrCLV3 regulation of the WOX gene CrWOXA during the developmental stage when female gametangium formation begins. These discoveries open a new avenue for CLE peptide research in the fern and clarify the evolutionary timeline of CLE-WOX signaling in land plants.

Indexed as

FernsGerm Cells, PlantHomeodomain ProteinsPlant ProteinsGene Expression Regulation, PlantMeristemSignal TransductionTranscription FactorsHomeodomain ProteinsPlant ProteinsTranscription FactorsCeratopteris, meristemCLAVATA3/EMBRYO SURROUNDING REGIONgametangium

Identifiers

PMID39673734
PMCPMC11771683

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.