Evidence map›Paper›PMID 39673518›Full record

ArticleNucleic acids research2025

Point mutations in functionally diverse genes are associated with increased natural DNA transformation in multidrug resistant Streptococcus pneumoniae.

Flora Peillard-Fiorente, Nguyen Phuong Pham, Hélène Gingras, Chantal Godin, Jie Feng, Philippe Leprohon, Marc Ouellette

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Flora Peillard-FiorenteCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.
Nguyen Phuong PhamCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.
Hélène GingrasCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.
Chantal GodinCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.
Jie FengState Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, 52, Sanlihe Rd, Xicheng District, Beijing 100045, China.ORCID 0000-0001-5172-6643
Philippe LeprohonCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.
Marc OuelletteCentre de Recherche en Infectiologie, Axe des Maladies Infectieuses et Immunitaires du CHU de Québec and Département de Microbiologie, Infectiologie et Immunologie, Faculté de Médecine, Université Laval, 2707 Bd Laurier, Québec, QC G1V 4G2, Canada.ORCID 0000-0002-6743-9646

Funding

CIHR FND167283
6 · The paper itself

Abstract

DNA transformation is key for phenotypic diversity and adaptation of Streptococcus pneumoniae including in the emergence of multidrug resistance (MDR). Under laboratory conditions, DNA transformation is facilitated by the artificial triggering of competence by the competence stimulating peptide (CSP). In ongoing DNA transformation work, we observed that exogenous CSP was dispensable depending on the combination of strains and culture media. Here, we carried out a chemogenomic screen to select for S. pneumoniae mutants capable of natural transformation in medium that normally would not sustain natural transformation. Our chemogenomic screen relied on chemical mutagenesis followed by selection of mutants with increased DNA transformation capacities. Sequencing the genome of these mutants revealed an abundance and diversity of mutated genes proven experimentally to increase natural transformation. A genome wide association study between MDR and sensitive clinical isolates revealed gene mutations associated with MDR, many of which intersected with those pinpointed by our chemogenomic screens and that were proven to increase natural transformation. S. pneumoniae has adopted DNA transformation as its lifestyle and can select for mutations facilitating DNA transformation.

Indexed as

Drug Resistance, Multiple, BacterialPoint MutationStreptococcus pneumoniaeTransformation, BacterialAnti-Bacterial AgentsBacterial ProteinsDNA, BacterialGenome, BacterialGenome-Wide Association StudyHumansAnti-Bacterial AgentsBacterial ProteinsDNA, Bacterial

Identifiers

PMID39673518
PMCPMC11724299

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.