Evidence map›Paper›PMID 39670059›Full record

ArticleISME communications2024

Aromatic amino acid metabolism and active transport regulation are implicated in microbial persistence in fractured shale reservoirs.

Chika Jude Ugwuodo, Fabrizio Colosimo, Jishnu Adhikari, Samuel O Purvine, Elizabeth K Eder, David W Hoyt, Stephanie A Wright, Mary S Lipton, Paula J Mouser

Abstract read
In one paragraph

Article in ISME communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chika Jude UgwuodoNatural Resources and Earth Systems Science, University of New Hampshire, Durham, NH 03824, United States.
Fabrizio ColosimoNew England Biolabs, Ipswich, MA, 01938, United States.
Jishnu AdhikariTetra Tech Inc., King of Prussia, PA, 19406, United States.
Samuel O PurvineEnvironmental and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, United States.
Elizabeth K EderEnvironmental and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, United States.
David W HoytEnvironmental and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, United States.
Stephanie A WrightEnvironmental and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, United States.
Mary S LiptonEnvironmental and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, 99352, United States.
Paula J MouserDepartment of Civil and Environmental Engineering, University of New Hampshire, Durham, NH 03824, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydraulic fracturing has unlocked vast amounts of hydrocarbons trapped within unconventional shale formations. This large-scale engineering approach inadvertently introduces microorganisms into the hydrocarbon reservoir, allowing them to inhabit a new physical space and thrive in the unique biogeochemical resources present in the environment. Advancing our fundamental understanding of microbial growth and physiology in this extreme subsurface environment is critical to improving biofouling control efficacy and maximizing opportunities for beneficial natural resource exploitation. Here, we used metaproteomics and exometabolomics to investigate the biochemical mechanisms underpinning the adaptation of model bacterium

Indexed as

Halanaerobiumfractured shalehydraulic retention timemetabolomicsproduced waterproteomicssalinity

Identifiers

PMID39670059
PMCPMC11637423

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.