Evidence map›Paper›PMID 39668804›Full record

ArticleEnvironmental science & technology2024

Influence of Environmental Conditions on the Escape Rates of Biocontained Genetically Engineered Microbes.

Anna M Hartig, Wentao Dai, Ke Zhang, Krisha Kapoor, Austin G Rottinghaus, Tae Seok Moon, Kimberly M Parker

Abstract read
In one paragraph

Article in Environmental science & technology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anna M HartigDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0000-0002-1929-2520
Wentao DaiDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0000-0002-7039-1495
Ke ZhangDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0000-0001-6407-8016
Krisha KapoorDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0009-0009-7871-1367
Austin G RottinghausDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.
Tae Seok MoonDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0000-0001-8373-9051
Kimberly M ParkerDepartment of Energy, Environmental, and Chemical Engineering, Washington University in St. Louis, St. Louis, Missouri 63130, United States.ORCID 0000-0002-5380-8893

Funding

Tunable therapeutic modulation of the gut microbiome by engineered probioticsR01AT009741 · NCCIH · WASHINGTON UNIVERSITY · PI DANTAS, GAUTAM, MOON, TAE SEOK · 2018 to 2022
$3.5M
NCCIH NIH HHS R01 AT009741
6 · The paper itself

Abstract

The development of genetically engineered microbes (GEMs) has resulted in an urgent need to control their persistence in the environment. The use of biocontainment such as kill switches is a critical approach to prevent the unintended proliferation of GEMs; however, the effectiveness of kill switches─reported as escape rates, i.e., the ratio of the number of viable microbes when the kill switch is triggered relative to the number when it is not triggered─is typically assessed under laboratory conditions that do not resemble environmental conditions under which biocontainment must perform. In this study, we discovered that the escape rate of an

Indexed as

Escherichia coliGenetic EngineeringbiocontainmentbiosafetyCRISPR-Cas9escape ratesgenetically engineered microbeskill switchrisk assessment

Identifiers

PMID39668804
PMCPMC11750180

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.