Evidence map›Paper›PMID 39666777›Full record

ArticlePloS one2024

Fission yeast essential nuclear pore protein Nup211 regulates the expression of genes involved in cytokinesis.

Domenick Kamel, Ayisha Sookdeo, Ayana Ikenouchi, Hualin Zhong

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Domenick KamelDepartment of Biological Sciences, Hunter College, The City University of New York, New York, NY, United States of America.ORCID 0009-0003-6668-8549
Ayisha SookdeoThe Graduate Center, The City University of New York, New York, NY, United States of America.
Ayana IkenouchiDepartment of Biological Sciences, Hunter College, The City University of New York, New York, NY, United States of America.
Hualin ZhongDepartment of Biological Sciences, Hunter College, The City University of New York, New York, NY, United States of America.ORCID 0009-0003-4004-2395

Funding

RISE Program Hunter College Option IIIR25GM060665 · NIGMS · HUNTER COLLEGE · PI ORTIZ, BENJAMIN D.,, SERRANO, PETER A · 2000 to 2022
$22.8M
NIGMS NIH HHS R25 GM060665
6 · The paper itself

Abstract

Nuclear pore proteins control nucleocytoplasmic transport; however, certain nucleoporins play regulatory roles in activities such as transcription and chromatin organization. The fission yeast basket nucleoporin Nup211 is implicated in mRNA export and is essential for cell viability. Nup211 preferentially associates with heterochromatin, however, it is unclear whether it plays a role in regulating transcription. To better understand its functions, we constructed a nup211 "shut-off" strain and observed that Nup211 depletion led to severe defects in cell cycle progression, including septation and cytokinesis. Using RNA-Seq and RT-qPCR, we revealed that loss of Nup211 significantly altered the mRNA levels of a set of genes crucial for cell division. Using domain analysis and CRISPR/cas9 technology, we determined that the first 655 residues of Nup211 are sufficient for viability. This truncated protein was detected at the nuclear periphery. Furthermore, exogenous expression of this domain in nup211 shut-off cells effectively restored both cell morphology and transcript abundance for some selected genes. Our findings unveil a novel role for Nup211 in regulating gene expression.

Indexed as

CytokinesisGene Expression Regulation, FungalNuclear Pore Complex ProteinsSchizosaccharomycesSchizosaccharomyces pombe ProteinsRNA, MessengerNuclear Pore Complex ProteinsRNA, MessengerSchizosaccharomyces pombe Proteins

Identifiers

PMID39666777
PMCPMC11637317

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.