Evidence map›Paper›PMID 39666215›Full record

ArticleJournal of molecular modeling2024

Chemical feature-based machine learning model for predicting photophysical properties of BODIPY compounds: density functional theory and quantitative structure-property relationship modeling.

Gerardo M Casanola-Martin, Jing Wang, Jian-Ge Zhou, Bakhtiyor Rasulev, Jerzy Leszczynski

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Article in Journal of molecular modeling, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Gerardo M Casanola-MartinDepartment of Coatings and Polymeric Materials, North Dakota State University, Fargo, ND, 58102, USA.
Jing WangInterdisciplinary Center for Nanotoxicity, Department of Chemistry, Physics, and Atmospheric Sciences, Jackson State University, Jackson, MS, 39217, USA.
Jian-Ge ZhouInterdisciplinary Center for Nanotoxicity, Department of Chemistry, Physics, and Atmospheric Sciences, Jackson State University, Jackson, MS, 39217, USA.
Bakhtiyor RasulevDepartment of Coatings and Polymeric Materials, North Dakota State University, Fargo, ND, 58102, USA. bakhtiyor.rasulev@ndsu.edu.
Jerzy LeszczynskiInterdisciplinary Center for Nanotoxicity, Department of Chemistry, Physics, and Atmospheric Sciences, Jackson State University, Jackson, MS, 39217, USA. jerzy@icnanotox.org.

Funding

National Science Foundation EES-2300321National Science Foundation IIA-1355466National Science Foundation OIA-1757220U.S. Department of Energy DE-SC0022239
6 · The paper itself

Abstract

contextBoron-dipyrromethene (BODIPY) compounds have unique photophysical properties and have been applied in fluorescence imaging, sensing, optoelectronics, and beyond. In order to design effective BODIPY compounds, it is crucial to acquire a comprehensive understanding of the relationships between the structures of BODIPY and the corresponding photoproperties. Fifteen molecular descriptors were identified to be strongly correlated with the maximum absorption wavelength. The developed ML/QSPR model exhibited good predictive performance, with coefficients of determination (R

methodsIn the present study, all the BODIPY models studied were fully optimized, and the corresponding absorption spectrum was obtained at DFT/TDDFT//B3LYP/6-311G(d,p) level. All the above calculations were executed by the Gaussian 16 program. Based upon the theoretical computational results, the machine learning-based quantitative structure-property relationship (ML/QSPR) model was employed for predicting the maximum absorption wavelength (λ) of BODIPY compounds by combining hand-crafted molecular descriptors (MD) and explainable machine learning (EML) techniques using Scikit-learn python library. A dataset of 131 BODIPY compounds with their experimental photophysical properties was used to generate a diverse set of molecular descriptors capturing information about the size, shape, connectivity, and other structural features of these compounds using Chemaxon and Alvadesc software. A genetic algorithm (GA) variable selection together with the multi-linear regression (MLR) method were applied to develop the best predictive model using the Genetic Selection python library.

Indexed as

Absorption wavelengthBODIPYDFTExplainable machine learningTDDFT

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.