Evidence map›Paper›PMID 39660553›Full record

ArticleThe Plant cell2024

The DENSE AND ERECT PANICLE1-GRAIN NUMBER ASSOCIATED module enhances rice yield by repressing CYTOKININ OXIDASE 2 expression.

Jinhui Zhang, Qibing Lin, Xin Wang, Jiale Shao, Yulong Ren, Xin Liu, Miao Feng, Shuai Li, Qi Sun, Sheng Luo and 5 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. An extra-large panicle gene ELP1 from wild rice Oryza officinalis increases grain number and grain yield.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  7. SP3 and DEP1 Orchestrate Panicle Architecture by Jointly Regulating APO2 Expression in Rice.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jinhui ZhangState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0009-0000-2743-7833
Qibing LinState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-3494-286X
Xin WangState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0003-1142-3562
Jiale ShaoState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0009-0003-6311-2157
Yulong RenState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-9032-3529
Xin LiuState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0003-1609-1587
Miao FengState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-7663-673X
Shuai LiState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-3239-7941
Qi SunState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0009-0003-7835-5549
Sheng LuoState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0001-9156-911X
Bojuan LiuState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-5531-7051
Xinxin XingState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-6792-7164
Yanqi ChangState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-8255-6824
Zhijun ChengState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-2768-8162
Jianmin WanState Key Laboratory of Crop Gene Resources and Breeding, Chinese Academy of Agricultural Sciences, Institute of Crop Sciences, Beijing 100081, China.ORCID 0000-0002-0017-8760

Funding

Central Public-interest Scientific Institution Basal Research Fund Y2024YJ13National Key Research and Development Program of China 2022YFF1002903Yazhouwan Scientific and Technological Administration of Sanya YBXM2425
6 · The paper itself

Abstract

The phytohormone cytokinin (CK) positively regulates the activity of the inflorescence meristem (IM). Cytokinin oxidase 2/Grain number 1a (OsCKX2/Gn1a)-mediated degradation of CK in rice (Oryza sativa L.) negatively regulates panicle grain number, whereas DENSE AND ERECT PANICLE 1 (DEP1) positively regulates grain number per panicle (GNP). However, the detailed regulatory mechanism between DEP1 and OsCKX2 remains elusive. Here, we report the GRAS (GIBBERELLIN ACID INSENSITIVE, REPRESSOR OF GA1, and SCARECROW) transcription factor GRAIN NUMBER ASSOCIATED (GNA), previously thought to be involved in the Brassinosteroids (BRs) signaling pathway, directly inhibits OsCKX2 expression in the IM through a DEP1-GNA regulatory module. Overexpressing GNA leads to increased CK levels and consequently higher branch number, GNP, and yield. Both DEP1 and dep1 enhance the inhibitory effect of GNA on OsCKX2 expression through interacting with GNA. GNA promotes the translocation of DEP1 to the nucleus, while the gain-of-function mutant dep1 translocates into the nucleus in the absence of GNA. Our findings provide insight into the regulatory mechanism underlying OsCKX2 and a strategy to improve rice yield.

Indexed as

Gene Expression Regulation, PlantOryzaOxidoreductasesPlant ProteinsCytokininsMeristemPlants, Genetically ModifiedTranscription Factorscytokinin oxidaseCytokininsOxidoreductasesPlant ProteinsTranscription Factors

Identifiers

PMID39660553
PMCPMC11663551

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.