Evidence map›Paper›PMID 39660530›Full record

ArticleCancer medicine2024

Gene Expression Profiling of Pancreatic Ductal Adenocarcinoma Arising From Intraductal Papillary Mucinous Neoplasms of the Pancreas.

William A Ziaziaris, Christopher S H Lim, Loretta Sioson, Anthony J Gill, Jaswinder S Samra, Sumit Sahni, Anubhav Mittal

Abstract read
In one paragraph

Article in Cancer medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Laser capture microdissection.Nature reviews. Methods primers · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

William A ZiaziarisDepartment of Upper Gastrointestinal Surgery, Royal North Shore Hospital, Sydney, Australia.
Christopher S H LimDepartment of Upper Gastrointestinal Surgery, Royal North Shore Hospital, Sydney, Australia.
Loretta SiosonNSW Health Pathology, Department of Anatomical Pathology, Royal North Shore Hospital, Sydney, Australia.
Anthony J GillFaculty of Medical and Health, The University of Sydney, Sydney, Australia.
Jaswinder S SamraDepartment of Upper Gastrointestinal Surgery, Royal North Shore Hospital, Sydney, Australia.
Sumit SahniFaculty of Medical and Health, The University of Sydney, Sydney, Australia.ORCID 0000-0002-2900-8845
Anubhav MittalDepartment of Upper Gastrointestinal Surgery, Royal North Shore Hospital, Sydney, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionIntraductal papillary mucinous neoplasms (IPMNs) are diverse premalignant tumors of the pancreas. They progress stepwise from adenoma to carcinoma and offer an opportunity for intervention prior to malignant transformation into pancreatic ductal adenocarcinoma (PDAC). The current study aimed to identify differentially expressed genes (DEGs) in invasive PDAC-associated IPMN vs. noninvasive IPMN to understand the potential molecular changes involved in malignant transformation of IPMN into PDAC. MATERIALS AND

methodsArchived tissue and data from 12 patients with histologically proven invasive PDAC arising from IPMN specimens were assessed. Gene expression analysis was performed on RNA extracted from macro-dissected tissue specimens using the NanoString nCounter PanCancer Progression assay. Statistical and pathway analysis was performed using SPSS v28 and Ingenuity Pathway Analysis, respectively.

resultsA total of 159 genes had significantly (p < 0.05, q < 0.05) different expression in PDAC arising from IPMN compared with that from IPMN alone (91 overexpressed and 68 underexpressed). Interestingly, 14 of top 10 over- and underexpressed genes were predicted to translate secretory proteins, with SignalP scores approaching 1. A number of differential canonical pathways (e.g., LXR/RXR activation pathway, glycolysis I gluconeogenesis I, and hepatic fibrosis) and potential upstream regulators (e.g., TGFB1, THBS2, etc.) were also identified.

conclusionA differential gene expression profile between PDAC arising from IPMN and IPMN alone was identified. Pathway analysis identified potential mechanisms involved in malignant transformation of IPMN to PDAC.

Indexed as

Carcinoma, Pancreatic DuctalGene Expression ProfilingPancreatic Intraductal NeoplasmsPancreatic NeoplasmsAdenocarcinoma, MucinousAgedBiomarkers, TumorCell Transformation, NeoplasticFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedBiomarkers, Tumorgene expression analysisintraductal pancreatic mucinous neoplasm (IPMN)molecular biomarkerspancreatic cystspancreatic ductal adenocarcinomapancreatic neoplasms

Identifiers

PMID39660530
PMCPMC11632396

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