Evidence map›Paper›PMID 39658336›Full record

ArticleGenome biology and evolution2025

Chromosome-level Genome Assembly and Annotation of the Arctic Moss Ptychostomum knowltonii.

Changling Ma, Xuping Zhou, Dan Huang, Li Zhang, Yifeng Yao, Yang Liu, Shanshan Dong, Tao Peng

Abstract read
In one paragraph

Article in Genome biology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. The Importance of thePlants (Basel, Switzerland) · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Changling MaSchool of Life Sciences, Guizhou Normal University, Guiyang 550025, China.ORCID 0009-0006-7572-7687
Xuping ZhouKey Laboratory of Southern Subtropical Plant Diversity, Fairy Lake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen 518004, China.ORCID 0000-0001-5783-053X
Dan HuangSchool of Life Sciences, Guizhou Normal University, Guiyang 550025, China.ORCID 0000-0002-1074-9256
Li ZhangKey Laboratory of Southern Subtropical Plant Diversity, Fairy Lake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen 518004, China.ORCID 0000-0002-0745-3841
Yifeng YaoState Key Laboratory of Plant Diversity and Specialty Crops, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.ORCID 0000-0002-9218-2715
Yang LiuKey Laboratory of Southern Subtropical Plant Diversity, Fairy Lake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen 518004, China.ORCID 0000-0002-5942-839X
Shanshan DongKey Laboratory of Southern Subtropical Plant Diversity, Fairy Lake Botanical Garden, Shenzhen & Chinese Academy of Sciences, Shenzhen 518004, China.ORCID 0000-0002-2557-3361
Tao PengSchool of Life Sciences, Guizhou Normal University, Guiyang 550025, China.ORCID 0000-0002-9255-8751

Funding

Scientific Foundation of the Urban Management Bureau of Shenzhen 202302
6 · The paper itself

Abstract

The polar regions host a diverse array of moss species that have evolved to thrive in extreme environments. These mosses exhibit remarkable adaptations, including tolerance to freezing temperatures, desiccation, and ultraviolet radiation. Despite their ecological significance, genomic data on these organisms are still limited, impeding our understanding of their evolutionary history and adaptive mechanisms in the context of climate change. In this study, we present the first chromosome-scale genome assembly and annotation of the Arctic moss Ptychostomum knowltonii. The assembled genome is 408.8 Mb in size, anchored to 12 pseudochromosomes, with a scaffold N50 of 32.61 Mb. Repetitive elements account for 56.24% of the genome. The genome contains 28,014 protein-coding genes, with a BUSCO completeness of 96.20%. This genomic resource will enable future comparative genomic studies, enhancing our understanding of how polar mosses may respond to a warming climate and shedding light on their evolutionary trajectories in persistently extreme environments.

Indexed as

Genome, PlantArctic RegionsBryophytaBryopsidaChromosomes, PlantMolecular Sequence Annotationadaptationbryophytecomparative genomicpolar

Identifiers

PMID39658336
PMCPMC11704416

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.