Evidence map›Paper›PMID 39657585›Full record

ArticleJournal of experimental botany2025

Haplotyped genome mapping and functional characterization of a blueberry anthocyanin acetyltransferase (AAT) controlling the accumulation of acylated anthocyanins.

Andrew P Dare, Chen Wu, Jose I Carvajal, Han M Nguyen, Catrin S Günther, Cyril Hamiaux, Sarah Bailey, Cecilia Deng, Molla F Mengist, Massimo Iorizzo and 4 more

Abstract read
In one paragraph

Article in Journal of experimental botany, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Andrew P DareThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0000-0002-8973-9332
Chen WuThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0000-0003-1499-9567
Jose I CarvajalThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.
Han M NguyenThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.
Catrin S GüntherThe New Zealand Institute for Plant and Food Research Limited, Ruakura, New Zealand.
Cyril HamiauxThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0000-0001-9198-3441
Sarah BaileyThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0009-0006-0131-1638
Cecilia DengThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0000-0002-2954-762X
Molla F MengistPlants for Human Health Institute, North Carolina State University, Kannapolis, NC, USA.
Massimo IorizzoPlants for Human Health Institute, North Carolina State University, Kannapolis, NC, USA.ORCID 0000-0002-0032-8247
Toshi M FosterThe New Zealand Institute for Plant and Food Research Limited, Motueka, New Zealand.ORCID 0000-0002-2829-4384
David ChagnéGenomics Aotearoa, Dunedin, New Zealand.ORCID 0000-0003-4018-0694
Sara MontanariThe New Zealand Institute for Plant and Food Research Limited, Motueka, New Zealand.ORCID 0000-0001-9224-056X
Richard V EspleyThe New Zealand Institute for Plant and Food Research Limited, Auckland, New Zealand.ORCID 0000-0002-1732-3688

Funding

National Institute of Food and Agriculture 1008691United States Department of Agriculture 2019-51181-30015
6 · The paper itself

Abstract

Blueberry has a diversity of anthocyanins that confer its characteristic blue-coloured skin. Whilst most cultivars produce only anthocyanin glycosides, some can add aliphatic or aromatic groups to the sugar moiety to create acylated anthocyanins. Due to their enhanced stability, acylated anthocyanins represent an attractive breeding target in blueberry. In this study, a haplotype-resolved assembly of a previously identified quantitative trait locus on chromosome 2 of 'Hortblue Petite' (Vaccinium corymbosum) was created to identify candidate anthocyanin acyltransferase genes. One full-length gene (VcAAT1a) was selected based on quantitative PCR expression profiling and transient expression in tobacco leaves and in strawberry and blueberry fruit flesh. In all three systems, VcAAT1a was able to produce a range of acylated anthocyanins in planta. Recombinant VcAAT1a protein demonstrated that, while VcAAT1a was able to act on both anthocyanin 3-O-glucosides and 3-O-galactosides, it could only utilize acetyl-CoA as an acyl donor. Protein modelling using AlphaFold suggested that this restricted range in acyl donors may be due to a spatially restricted sub-pocket in the acyl-binding site of VvAAT1. Finally, LUC/REN promoter activation assays revealed that the VcAAT1a promoter was transactivated by the VcMYBPA1 and VcMYBPA2 transcription factors, further expanding our knowledge of anthocyanin regulation in blueberry.

Indexed as

AnthocyaninsBlueberry PlantsPlant ProteinsAcylationChromosome MappingGene Expression Regulation, PlantHaplotypesAnthocyaninsPlant ProteinsCausative variantgenome assemblypolyploidquantitative trait locus (QTL)trio-binningVaccinium

Identifiers

PMID39657585
PMCPMC11981897

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.