Evidence map›Paper›PMID 39656842›Full record

ArticleBiostatistics (Oxford, England)2025

Bayesian subtyping for multi-state brain functional connectome with application on preadolescent brain cognition.

Tianqi Chen, Hongyu Zhao, Chichun Tan, Todd Constable, Sarah Yip, Yize Zhao

Abstract read
In one paragraph

Article in Biostatistics (Oxford, England), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Sex-specific topological structure associated with dementia via latent space estimation.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tianqi ChenDepartment of Biostatistics, Yale University, 300 George St, New Haven, CT 06520, United States.
Hongyu ZhaoDepartment of Biostatistics, Yale University, 300 George St, New Haven, CT 06520, United States.
Chichun TanDepartment of Biostatistics, Brown University, 121 S. Main St, Providence, RI 02912, United States.
Todd ConstableDepartment of Radiology and Biomedical Imaging, Yale University, 330 Cedar St, New Haven, CT 06520, United States.
Sarah YipDepartment of Psychiatry, Yale University, 333 Cedar St, New Haven, CT 06520, United States.
Yize ZhaoDepartment of Biostatistics, Yale University, 300 George St, New Haven, CT 06520, United States.ORCID 0000-0001-6283-2302

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
An integrative Bayesian approach for linking brain to behavioral phenotypeR01EB034720 · NIBIB · YALE UNIVERSITY · PI R Todd Constable, Yize Zhao · 2023 to 2026
$2.4M
Integrative analysis for patient-centered outcomes and time-to-event data in Alzheimer's diseaseRF1AG081413 · NIA · YALE UNIVERSITY · PI SUN, YIFEI, ZHAO, YIZE · 2023 to 2023
$2.3M
Novel integrative imaging genetics analysis for Alzheimer's disease riskand progressionRF1AG068191 · NIA · YALE UNIVERSITY · PI ZHAO, YIZE · 2021 to 2021
$1.9M
Application of a Bayesian strategy to ABCD: Identification of substance use risk and COVID-19 effects on neurodevelopmentR01DA053301 · NIDA · YALE UNIVERSITY · PI Sarah Yip · 2022 to 2026
$1.6M
Novel integrative imaging genetics analysis for Alzheimer's disease riskand progressionR01AG068191 · NIA · YALE UNIVERSITY · PI ZHAO, YIZE · 2024 to 2025
$1.2M
NCATS NIH HHS UL1 TR001863NIA NIH HHS R01 AG068191NIA NIH HHS RF1 AG068191NIA NIH HHS RF1 AG081413NIBIB NIH HHS R01 EB034720NIDA NIH HHS R01 DA053301NIH HHS RF1AG081413
6 · The paper itself

Abstract

Converging evidence indicates that the heterogeneity of cognitive profiles may arise through detectable alternations in brain functional connectivity. Despite an unprecedented opportunity to uncover neurobiological subtypes through clustering or subtyping analyses on multi-state functional connectivity, few existing approaches are applicable to accommodate the network topology and unique biological architecture. To address this issue, we propose an innovative Bayesian nonparametric network-variate clustering analysis to uncover subgroups of individuals with homogeneous brain functional network patterns under multiple cognitive states. In light of the existing neuroscience literature, we assume there are unknown state-specific modular structures within functional connectivity. Concurrently, we identify informative network features essential for defining subtypes. To further facilitate practical use, we develop a computationally efficient variational inference algorithm to approximate posterior inference with satisfactory estimation accuracy. Extensive simulations show the superiority of our method. We apply the method to the Adolescent Brain Cognitive Development (ABCD) study, and identify neurodevelopmental subtypes and brain sub-network phenotypes under each state to signal neurobiological heterogeneity, suggesting promising directions for further exploration and investigation in neuroscience.

Indexed as

BrainCognitionConnectomeAdolescentAlgorithmsBayes TheoremChildCluster AnalysisFemaleHumansMagnetic Resonance ImagingMalebrain connectivityDirichlet processnetwork-variate clusteringstochastic block modelsubtypingvariational inference

Identifiers

PMID39656842
PMCPMC11823269

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.