Evidence map›Paper›PMID 39655644›Full record

ArticleThe Journal of comparative neurology2024

Irx3/5 Null Deletion in Mice Blocks Cochlea-Saccule Segregation and Disrupts the Auditory Tonotopic Map.

Bernd Fritzsch, Xin Weng, Ebenezer N Yamoah, Tianli Qin, Chi-Chung Hui, Laura Lebrón-Mora, Gabriela Pavlinkova, Mai Har Sham

Abstract read
In one paragraph

Article in The Journal of comparative neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Frontiers in cell and developmental biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bernd FritzschDepartment of Neurological Sciences, University of Nebraska Medical Center, Omaha, Nebraska, USA.ORCID 0000-0002-4882-8398
Xin WengSchool of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.ORCID 0009-0007-0207-1952
Ebenezer N YamoahDepartment of Translational Neuroscience, College of Medicine, University of Arizona, Phoenix, Arizona, USA.
Tianli QinSchool of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.
Chi-Chung HuiProgram in Developmental & Stem Cell Biology, The Hospital for Sick Children, Toronto, Ontario, Canada.
Laura Lebrón-MoraLaboratory of Molecular Pathogenetics, Institute of Biotechnology CAS, Vestec, Czechia.ORCID 0009-0002-6250-1217
Gabriela PavlinkovaLaboratory of Molecular Pathogenetics, Institute of Biotechnology CAS, Vestec, Czechia.
Mai Har ShamSchool of Biomedical Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong SAR, China.

Funding

Structural Analyses CoreP01AG051443 · NIA · UNIVERSITY OF NEVADA RENO · PI YAMOAH, EBENEZER N · 2016 to 2025
$15.5M
Inner ear ion channels in healthy and diseased conditionsR01DC016099 · NIDCD · UNIVERSITY OF NEVADA RENO · PI EBENEZER N YAMOAH · 2017 to 2026
$4.7M
Mechanisms of Growth Factor Responsiveness in the Aging Auditory SystemR01AG060504 · NIA · UNIVERSITY OF NEVADA RENO · PI FRITZSCH, BERND, YAMOAH, EBENEZER N · 2018 to 2022
$2.5M
NIA NIH HHS P01 AG051443NIA NIH HHS R01 AG060504NIDCD NIH HHS R01 DC016099NIH HHS AG051443NIH HHS AG060504
6 · The paper itself

Abstract

A gene cadre orchestrates the normal development of sensory and non-sensory cells in the inner ear, segregating the cochlea with a distinct tonotopic sound frequency map, similar brain projection, and five vestibular end-organs. However, the role of genes driving the ear development is largely unknown. Here, we show double deletion of the Iroquois homeobox 3 and 5 transcription factors (Irx3/5 DKO) leads to the fusion of the saccule and the cochlear base. The overlying otoconia and tectorial membranes are absent in the Irx3/5 DKO inner ear, and the primary auditory neurons project fibers to both the saccule and cochlear hair cells. The central neuronal projections from the cochlear apex-base contour are not fully segregated into a dorsal and ventral innervation in the Irx3/5 DKO cochlear nucleus, obliterating the characteristic tonotopic auditory map. Additionally, Irx3/5 deletion reveals a pronounced cochlear-apex-vestibular "vestibular-cochlear" nerve (VCN) bilateral connection that is less noticeable in wild-type control mice. Moreover, the incomplete segregation of apex and base projections that expands fibers to connect with vestibular nuclei. The results suggest the mammalian cochlear apex is a derived lagena reminiscent of sarcopterygians. Thus, Irx3 and 5 are potential evolutionary branch-point genes necessary for balance-sound segregation, which fused into a saccule-cochlea organization.

Indexed as

CochleaHomeodomain ProteinsMice, KnockoutSaccule and UtricleTranscription FactorsAnimalsAuditory PathwaysMiceHomeodomain ProteinsIrx3 protein, mouseIrx5 protein, mouseTranscription Factorsbrainstemcochleadevelopmenttectorial membrane

Identifiers

PMID39655644
PMCPMC11629443

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.