Evidence map›Paper›PMID 39655263›Full record

ArticleComputational and structural biotechnology journal2024

Automatic classification of fungal-fungal interactions using deep leaning models.

Marjan Mansourvar, Jonathan Funk, Søren Dalsgård Petersen, Sajad Tavakoli, Jakob Blæsbjerg Hoof, David Llorente Corcoles, Sabrina M Pittroff, Lars Jelsbak, Niels Bjerg Jensen, Ling Ding and 1 more

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Marjan MansourvarDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Jonathan FunkDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Søren Dalsgård PetersenDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Sajad TavakoliDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Jakob Blæsbjerg HoofDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
David Llorente CorcolesDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Sabrina M PittroffDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Lars JelsbakDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Niels Bjerg JensenDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Ling DingDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.
Rasmus John Normand FrandsenDepartment of Biotechnology and Biomedicine (DTU Bioengineering) Technical University of Denmark, Søltofts Plads, Kgs. Lyngby 2800, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungi provide valuable solutions for diverse biotechnological applications, such as enzymes in the food industry, bioactive metabolites for healthcare, and biocontrol organisms in agriculture. Current workflows for identifying new biocontrol fungi often rely on subjective visual observations of strains' performance in microbe-microbe interaction studies, making the process time-consuming and difficult to reproduce. To overcome these challenges, we developed an AI-automated image classification approach using machine learning algorithm based on deep neural network. Our method focuses on analyzing standardized images of 96-well microtiter plates with solid medium for fungal-fungal challenge experiments. We used our model to categorize the outcome of interactions between the plant pathogen

Indexed as

AutomationBiocontrolComputer visionDeep learningFungal growthMachine learning

Identifiers

PMID39655263
PMCPMC11626056

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.