Evidence map›Paper›PMID 39652603›Full record

ArticlePloS one2024

Genotype x environment interaction in cassava multi-environment trials via analytic factor.

Juraci Souza Sampaio Filho, Isadora Cristina Martins Oliveira, Maria Marta Pastina, Marcos de Souza Campos, Eder Jorge de Oliveira

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Heterogeneity of Variances in Milk Yield in Murrah Buffaloes.Animals : an open access journal from MDPI · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Juraci Souza Sampaio FilhoFederal University of Recôncavo da Bahia, Centro de Ciências Agrárias, Ambientais e Biológicas, Cruz das Almas, Bahia, Brazil.
Isadora Cristina Martins OliveiraEmbrapa Milho e Sorgo, Sete Lagoas, MG, Brazil.
Maria Marta PastinaEmbrapa Milho e Sorgo, Sete Lagoas, MG, Brazil.
Marcos de Souza CamposEmbrapa Mandioca e Fruticultura, Nugene, Cruz das Almas, Bahia, Brazil.
Eder Jorge de OliveiraEmbrapa Mandioca e Fruticultura, Nugene, Cruz das Almas, Bahia, Brazil.ORCID 0000-0001-8992-7459

Funding

Gates Foundation INV-007637
6 · The paper itself

Abstract

The variability in genetic variance and covariance due to genotype × environment interaction (G×E) can hinder genotype selection accuracy, especially for complex traits. This study analyzed G×E interactions in cassava to identify stable, high-performing genotypes and predict agronomic performance in untested environments using factor analytic multiplicative mixed models (FAMM) within multi-environment trials (METs). We evaluated 22 cassava genotypes for fresh root yield (FRY), dry root yield (DRY), shoot yield (ShY), and dry matter content (DMC) across 55 Brazilian environments. FAMM was applied to estimate genetic values and environmental loads, revealing significant genetic variance, especially for FRY (0.16-0.92) and broad-sense heritability ([Formula: see text]) above 0.70 in advanced yield trials. In joint analyses, analytic factor FA4 explained over 88% of genetic variation for all traits despite high G×E and data imbalance. Positive genetic correlations were found between environments for ShY and DRY (0.99 and 1.0, respectively), while FRY and DMC showed negative correlations (-0.82 and -0.95). Latent regression analysis identified hybrids adaptable to a range of environments, as well as genotypes suited to specific conditions. Moderate correlations between environmental covariables (rainfall, altitude, solar radiation) and FA model loadings suggest these factors contribute to high G×E interactions, notably for FRY. The FAMM model provided a robust approach to G×E analysis in cassava, yielding practical insights for breeding programs.

Indexed as

Gene-Environment InteractionGenotypeManihotBrazilEnvironmentGenetic VariationModels, GeneticPhenotypePlant BreedingPlant Roots

Identifiers

PMID39652603
PMCPMC11627386

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.